Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RPRD1AQ96P16 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
RPRD1AQ96P16 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RPRD1AQ96P16 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RPRD1AQ96P16 TNXA-203ENST00000507684 2038 ntBASIC19.07■□□□□ 0.64
RPRD1AQ96P16 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
RPRD1AQ96P16 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.06■□□□□ 0.64
RPRD1AQ96P16 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RPRD1AQ96P16 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.06■□□□□ 0.64
RPRD1AQ96P16 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
RPRD1AQ96P16 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.06■□□□□ 0.64
RPRD1AQ96P16 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RPRD1AQ96P16 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RPRD1AQ96P16 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RPRD1AQ96P16 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RPRD1AQ96P16 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RPRD1AQ96P16 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
RPRD1AQ96P16 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.06■□□□□ 0.64
RPRD1AQ96P16 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RPRD1AQ96P16 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RPRD1AQ96P16 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.06■□□□□ 0.64
RPRD1AQ96P16 MIR3180-4-201ENST00000582223 153 ntBASIC19.06■□□□□ 0.64
RPRD1AQ96P16 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.06■□□□□ 0.64
RPRD1AQ96P16 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.06■□□□□ 0.64
RPRD1AQ96P16 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
RPRD1AQ96P16 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RPRD1AQ96P16 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
RPRD1AQ96P16 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RPRD1AQ96P16 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.06■□□□□ 0.64
RPRD1AQ96P16 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RPRD1AQ96P16 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.05■□□□□ 0.64
RPRD1AQ96P16 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RPRD1AQ96P16 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RPRD1AQ96P16 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
RPRD1AQ96P16 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RPRD1AQ96P16 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RPRD1AQ96P16 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.05■□□□□ 0.64
RPRD1AQ96P16 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.05■□□□□ 0.64
RPRD1AQ96P16 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
RPRD1AQ96P16 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.05■□□□□ 0.64
RPRD1AQ96P16 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RPRD1AQ96P16 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RPRD1AQ96P16 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
RPRD1AQ96P16 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.05■□□□□ 0.64
RPRD1AQ96P16 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.05■□□□□ 0.64
RPRD1AQ96P16 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
RPRD1AQ96P16 AC009065.1-201ENST00000564055 1225 ntBASIC19.05■□□□□ 0.64
RPRD1AQ96P16 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.05■□□□□ 0.64
RPRD1AQ96P16 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.05■□□□□ 0.64
RPRD1AQ96P16 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RPRD1AQ96P16 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RPRD1AQ96P16 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.05■□□□□ 0.64
RPRD1AQ96P16 MYLKP1-201ENST00000509077 1580 ntBASIC19.05■□□□□ 0.64
RPRD1AQ96P16 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RPRD1AQ96P16 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
RPRD1AQ96P16 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.05■□□□□ 0.64
RPRD1AQ96P16 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RPRD1AQ96P16 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RPRD1AQ96P16 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
RPRD1AQ96P16 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.05■□□□□ 0.64
RPRD1AQ96P16 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RPRD1AQ96P16 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
RPRD1AQ96P16 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.04■□□□□ 0.64
RPRD1AQ96P16 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RPRD1AQ96P16 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RPRD1AQ96P16 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.04■□□□□ 0.64
RPRD1AQ96P16 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
RPRD1AQ96P16 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RPRD1AQ96P16 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RPRD1AQ96P16 AL031133.1-201ENST00000406807 723 ntBASIC19.04■□□□□ 0.64
RPRD1AQ96P16 AC092597.1-201ENST00000487352 616 ntBASIC19.04■□□□□ 0.64
RPRD1AQ96P16 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RPRD1AQ96P16 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RPRD1AQ96P16 LINC01311-201ENST00000565162 1445 ntBASIC19.04■□□□□ 0.64
RPRD1AQ96P16 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RPRD1AQ96P16 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.04■□□□□ 0.64
RPRD1AQ96P16 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.04■□□□□ 0.64
RPRD1AQ96P16 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RPRD1AQ96P16 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RPRD1AQ96P16 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
RPRD1AQ96P16 AC099343.3-201ENST00000605834 2503 ntBASIC19.04■□□□□ 0.64
RPRD1AQ96P16 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.04■□□□□ 0.64
RPRD1AQ96P16 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RPRD1AQ96P16 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.04■□□□□ 0.64
RPRD1AQ96P16 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
RPRD1AQ96P16 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
RPRD1AQ96P16 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RPRD1AQ96P16 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
RPRD1AQ96P16 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.03■□□□□ 0.64
RPRD1AQ96P16 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RPRD1AQ96P16 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RPRD1AQ96P16 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
RPRD1AQ96P16 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RPRD1AQ96P16 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
RPRD1AQ96P16 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.03■□□□□ 0.64
RPRD1AQ96P16 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
RPRD1AQ96P16 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.03■□□□□ 0.64
RPRD1AQ96P16 AL163051.1-201ENST00000569214 1512 ntBASIC19.03■□□□□ 0.64
RPRD1AQ96P16 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
RPRD1AQ96P16 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms