Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ALPK3Q96L96 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ALPK3Q96L96 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ALPK3Q96L96 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ALPK3Q96L96 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.12■□□□□ 0.81
ALPK3Q96L96 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ALPK3Q96L96 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ALPK3Q96L96 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC20.12■□□□□ 0.81
ALPK3Q96L96 AC105339.3-201ENST00000560043 636 ntBASIC20.12■□□□□ 0.81
ALPK3Q96L96 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
ALPK3Q96L96 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC20.12■□□□□ 0.81
ALPK3Q96L96 AC092364.2-202ENST00000597012 1073 ntBASIC20.12■□□□□ 0.81
ALPK3Q96L96 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ALPK3Q96L96 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC20.12■□□□□ 0.81
ALPK3Q96L96 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
ALPK3Q96L96 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
ALPK3Q96L96 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.12■□□□□ 0.81
ALPK3Q96L96 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ALPK3Q96L96 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC20.12■□□□□ 0.81
ALPK3Q96L96 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ALPK3Q96L96 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
ALPK3Q96L96 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ALPK3Q96L96 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ALPK3Q96L96 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC20.12■□□□□ 0.81
ALPK3Q96L96 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC20.12■□□□□ 0.81
ALPK3Q96L96 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC20.12■□□□□ 0.81
ALPK3Q96L96 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ALPK3Q96L96 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC20.11■□□□□ 0.81
ALPK3Q96L96 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ALPK3Q96L96 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
ALPK3Q96L96 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.11■□□□□ 0.81
ALPK3Q96L96 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ALPK3Q96L96 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ALPK3Q96L96 CNN2P11-201ENST00000429351 262 ntBASIC20.11■□□□□ 0.81
ALPK3Q96L96 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC20.11■□□□□ 0.81
ALPK3Q96L96 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC20.11■□□□□ 0.81
ALPK3Q96L96 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC20.11■□□□□ 0.81
ALPK3Q96L96 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC20.11■□□□□ 0.81
ALPK3Q96L96 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC20.11■□□□□ 0.81
ALPK3Q96L96 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ALPK3Q96L96 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC20.11■□□□□ 0.81
ALPK3Q96L96 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ALPK3Q96L96 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20.11■□□□□ 0.81
ALPK3Q96L96 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ALPK3Q96L96 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ALPK3Q96L96 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
ALPK3Q96L96 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.1■□□□□ 0.81
ALPK3Q96L96 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ALPK3Q96L96 SYS1-203ENST00000414310 795 ntTSL 3 BASIC20.1■□□□□ 0.81
ALPK3Q96L96 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC20.1■□□□□ 0.81
ALPK3Q96L96 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC20.1■□□□□ 0.81
ALPK3Q96L96 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC20.1■□□□□ 0.81
ALPK3Q96L96 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
ALPK3Q96L96 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.1■□□□□ 0.81
ALPK3Q96L96 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.1■□□□□ 0.81
ALPK3Q96L96 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ALPK3Q96L96 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ALPK3Q96L96 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ALPK3Q96L96 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
ALPK3Q96L96 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ALPK3Q96L96 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ALPK3Q96L96 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ALPK3Q96L96 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.1■□□□□ 0.81
ALPK3Q96L96 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC20.1■□□□□ 0.81
ALPK3Q96L96 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ALPK3Q96L96 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ALPK3Q96L96 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC20.1■□□□□ 0.81
ALPK3Q96L96 MIR770-201ENST00000390219 98 ntBASIC20.1■□□□□ 0.81
ALPK3Q96L96 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC20.1■□□□□ 0.81
ALPK3Q96L96 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ALPK3Q96L96 KRT18P2-201ENST00000447938 1258 ntBASIC20.1■□□□□ 0.81
ALPK3Q96L96 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
ALPK3Q96L96 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC20.1■□□□□ 0.81
ALPK3Q96L96 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ALPK3Q96L96 COX5A-206ENST00000568783 571 ntTSL 3 BASIC20.1■□□□□ 0.81
ALPK3Q96L96 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC20.1■□□□□ 0.81
ALPK3Q96L96 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC20.1■□□□□ 0.81
ALPK3Q96L96 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC20.1■□□□□ 0.81
ALPK3Q96L96 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.09■□□□□ 0.81
ALPK3Q96L96 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
ALPK3Q96L96 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.09■□□□□ 0.81
ALPK3Q96L96 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.09■□□□□ 0.81
ALPK3Q96L96 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
ALPK3Q96L96 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ALPK3Q96L96 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
ALPK3Q96L96 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.09■□□□□ 0.81
ALPK3Q96L96 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ALPK3Q96L96 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
ALPK3Q96L96 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ALPK3Q96L96 KRT18P27-201ENST00000427733 1299 ntBASIC20.09■□□□□ 0.81
ALPK3Q96L96 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC20.09■□□□□ 0.81
ALPK3Q96L96 AC108751.1-201ENST00000490852 363 ntBASIC20.09■□□□□ 0.81
ALPK3Q96L96 AC011467.2-201ENST00000598425 242 ntBASIC20.09■□□□□ 0.81
ALPK3Q96L96 AC064836.3-201ENST00000607928 673 ntBASIC20.09■□□□□ 0.81
ALPK3Q96L96 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ALPK3Q96L96 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ALPK3Q96L96 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ALPK3Q96L96 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.08■□□□□ 0.81
ALPK3Q96L96 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
ALPK3Q96L96 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms