Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 AF186192.3-201ENST00000583427 947 ntBASIC19.6■□□□□ 0.73
CALR3Q96L12 AP000692.2-201ENST00000608391 879 ntBASIC19.6■□□□□ 0.73
CALR3Q96L12 MIR6786-201ENST00000616843 113 ntBASIC19.6■□□□□ 0.73
CALR3Q96L12 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CALR3Q96L12 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CALR3Q96L12 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CALR3Q96L12 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CALR3Q96L12 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.6■□□□□ 0.73
CALR3Q96L12 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CALR3Q96L12 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.6■□□□□ 0.73
CALR3Q96L12 FLJ13224-201ENST00000313737 1514 ntBASIC19.6■□□□□ 0.73
CALR3Q96L12 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.6■□□□□ 0.73
CALR3Q96L12 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CALR3Q96L12 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CALR3Q96L12 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CALR3Q96L12 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CALR3Q96L12 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.59■□□□□ 0.73
CALR3Q96L12 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CALR3Q96L12 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CALR3Q96L12 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CALR3Q96L12 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.59■□□□□ 0.73
CALR3Q96L12 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.59■□□□□ 0.73
CALR3Q96L12 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
CALR3Q96L12 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.59■□□□□ 0.73
CALR3Q96L12 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CALR3Q96L12 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CALR3Q96L12 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CALR3Q96L12 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CALR3Q96L12 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.59■□□□□ 0.73
CALR3Q96L12 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CALR3Q96L12 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CALR3Q96L12 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.59■□□□□ 0.73
CALR3Q96L12 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CALR3Q96L12 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CALR3Q96L12 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CALR3Q96L12 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.58■□□□□ 0.73
CALR3Q96L12 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.58■□□□□ 0.73
CALR3Q96L12 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.58■□□□□ 0.73
CALR3Q96L12 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
CALR3Q96L12 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.58■□□□□ 0.73
CALR3Q96L12 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CALR3Q96L12 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
CALR3Q96L12 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.58■□□□□ 0.73
CALR3Q96L12 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
CALR3Q96L12 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.58■□□□□ 0.73
CALR3Q96L12 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.58■□□□□ 0.72
CALR3Q96L12 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CALR3Q96L12 AC008040.2-201ENST00000461049 708 ntBASIC19.58■□□□□ 0.72
CALR3Q96L12 B3GAT3P1-201ENST00000471720 806 ntBASIC19.58■□□□□ 0.72
CALR3Q96L12 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.58■□□□□ 0.72
CALR3Q96L12 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.58■□□□□ 0.72
CALR3Q96L12 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
CALR3Q96L12 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CALR3Q96L12 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CALR3Q96L12 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.58■□□□□ 0.72
CALR3Q96L12 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.58■□□□□ 0.72
CALR3Q96L12 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CALR3Q96L12 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CALR3Q96L12 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.57■□□□□ 0.72
CALR3Q96L12 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CALR3Q96L12 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CALR3Q96L12 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CALR3Q96L12 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.57■□□□□ 0.72
CALR3Q96L12 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CALR3Q96L12 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CALR3Q96L12 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CALR3Q96L12 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CALR3Q96L12 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CALR3Q96L12 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CALR3Q96L12 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CALR3Q96L12 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.57■□□□□ 0.72
CALR3Q96L12 AC006058.3-201ENST00000606217 1069 ntBASIC19.57■□□□□ 0.72
CALR3Q96L12 DGCR10-201ENST00000609839 495 ntBASIC19.57■□□□□ 0.72
CALR3Q96L12 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CALR3Q96L12 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CALR3Q96L12 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
CALR3Q96L12 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CALR3Q96L12 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.57■□□□□ 0.72
CALR3Q96L12 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.57■□□□□ 0.72
CALR3Q96L12 AC034236.2-201ENST00000606662 1610 ntBASIC19.57■□□□□ 0.72
CALR3Q96L12 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CALR3Q96L12 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CALR3Q96L12 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CALR3Q96L12 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CALR3Q96L12 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CALR3Q96L12 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CALR3Q96L12 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CALR3Q96L12 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CALR3Q96L12 AC096733.2-201ENST00000609937 1394 ntBASIC19.57■□□□□ 0.72
CALR3Q96L12 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CALR3Q96L12 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CALR3Q96L12 GNAS-203ENST00000306120 1878 ntBASIC19.56■□□□□ 0.72
CALR3Q96L12 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CALR3Q96L12 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CALR3Q96L12 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CALR3Q96L12 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CALR3Q96L12 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CALR3Q96L12 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
CALR3Q96L12 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CALR3Q96L12 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms