Protein–RNA interactions for Protein: Q96GD3

SCMH1, Polycomb protein SCMH1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1Q96GD3 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCMH1Q96GD3 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCMH1Q96GD3 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SCMH1Q96GD3 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SCMH1Q96GD3 SPDYE13P-201ENST00000445314 798 ntBASIC17.13■□□□□ 0.33
SCMH1Q96GD3 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.13■□□□□ 0.33
SCMH1Q96GD3 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.13■□□□□ 0.33
SCMH1Q96GD3 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCMH1Q96GD3 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
SCMH1Q96GD3 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCMH1Q96GD3 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.13■□□□□ 0.33
SCMH1Q96GD3 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCMH1Q96GD3 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCMH1Q96GD3 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCMH1Q96GD3 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCMH1Q96GD3 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCMH1Q96GD3 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCMH1Q96GD3 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCMH1Q96GD3 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SCMH1Q96GD3 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCMH1Q96GD3 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
SCMH1Q96GD3 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCMH1Q96GD3 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SCMH1Q96GD3 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCMH1Q96GD3 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCMH1Q96GD3 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SCMH1Q96GD3 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.12■□□□□ 0.33
SCMH1Q96GD3 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCMH1Q96GD3 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCMH1Q96GD3 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
SCMH1Q96GD3 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SCMH1Q96GD3 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.12■□□□□ 0.33
SCMH1Q96GD3 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.12■□□□□ 0.33
SCMH1Q96GD3 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SCMH1Q96GD3 SEC1P-202ENST00000473944 940 ntBASIC17.12■□□□□ 0.33
SCMH1Q96GD3 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.12■□□□□ 0.33
SCMH1Q96GD3 AC069148.1-201ENST00000608741 768 ntBASIC17.12■□□□□ 0.33
SCMH1Q96GD3 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.12■□□□□ 0.33
SCMH1Q96GD3 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCMH1Q96GD3 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.12■□□□□ 0.33
SCMH1Q96GD3 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCMH1Q96GD3 AL109659.2-201ENST00000606809 1674 ntBASIC17.12■□□□□ 0.33
SCMH1Q96GD3 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
SCMH1Q96GD3 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCMH1Q96GD3 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCMH1Q96GD3 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCMH1Q96GD3 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.12■□□□□ 0.33
SCMH1Q96GD3 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.12■□□□□ 0.33
SCMH1Q96GD3 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SCMH1Q96GD3 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.11■□□□□ 0.33
SCMH1Q96GD3 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.11■□□□□ 0.33
SCMH1Q96GD3 AL512353.2-201ENST00000448759 1962 ntBASIC17.11■□□□□ 0.33
SCMH1Q96GD3 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.11■□□□□ 0.33
SCMH1Q96GD3 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCMH1Q96GD3 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCMH1Q96GD3 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.11■□□□□ 0.33
SCMH1Q96GD3 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCMH1Q96GD3 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
SCMH1Q96GD3 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCMH1Q96GD3 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SCMH1Q96GD3 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCMH1Q96GD3 KRT18P56-201ENST00000507275 550 ntBASIC17.11■□□□□ 0.33
SCMH1Q96GD3 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.11■□□□□ 0.33
SCMH1Q96GD3 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.11■□□□□ 0.33
SCMH1Q96GD3 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
SCMH1Q96GD3 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.11■□□□□ 0.33
SCMH1Q96GD3 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.11■□□□□ 0.33
SCMH1Q96GD3 AC093458.2-201ENST00000623150 629 ntBASIC17.11■□□□□ 0.33
SCMH1Q96GD3 AC112497.1-201ENST00000624824 639 ntBASIC17.11■□□□□ 0.33
SCMH1Q96GD3 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.11■□□□□ 0.33
SCMH1Q96GD3 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SCMH1Q96GD3 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCMH1Q96GD3 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.11■□□□□ 0.33
SCMH1Q96GD3 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.11■□□□□ 0.33
SCMH1Q96GD3 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SCMH1Q96GD3 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SCMH1Q96GD3 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCMH1Q96GD3 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.11■□□□□ 0.33
SCMH1Q96GD3 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SCMH1Q96GD3 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SCMH1Q96GD3 AL032819.2-201ENST00000624543 2162 ntBASIC17.11■□□□□ 0.33
SCMH1Q96GD3 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCMH1Q96GD3 FEM1AP3-201ENST00000403722 1741 ntBASIC17.1■□□□□ 0.33
SCMH1Q96GD3 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.1■□□□□ 0.33
SCMH1Q96GD3 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCMH1Q96GD3 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
SCMH1Q96GD3 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCMH1Q96GD3 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SCMH1Q96GD3 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCMH1Q96GD3 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.1■□□□□ 0.33
SCMH1Q96GD3 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SCMH1Q96GD3 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SCMH1Q96GD3 AC092597.1-201ENST00000487352 616 ntBASIC17.1■□□□□ 0.33
SCMH1Q96GD3 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.1■□□□□ 0.33
SCMH1Q96GD3 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.1■□□□□ 0.33
SCMH1Q96GD3 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.1■□□□□ 0.33
SCMH1Q96GD3 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.1■□□□□ 0.33
SCMH1Q96GD3 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.1■□□□□ 0.33
SCMH1Q96GD3 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCMH1Q96GD3 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms