Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 AL359075.1-203ENST00000462729 1002 ntBASIC16.41■□□□□ 0.22
APH1AQ96BI3 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.41■□□□□ 0.22
APH1AQ96BI3 KRT18P41-201ENST00000518924 1277 ntBASIC16.41■□□□□ 0.22
APH1AQ96BI3 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.41■□□□□ 0.22
APH1AQ96BI3 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
APH1AQ96BI3 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.41■□□□□ 0.22
APH1AQ96BI3 AC009065.1-201ENST00000564055 1225 ntBASIC16.41■□□□□ 0.22
APH1AQ96BI3 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
APH1AQ96BI3 AC112777.1-201ENST00000540175 1423 ntBASIC16.41■□□□□ 0.22
APH1AQ96BI3 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.41■□□□□ 0.22
APH1AQ96BI3 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
APH1AQ96BI3 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
APH1AQ96BI3 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
APH1AQ96BI3 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.41■□□□□ 0.22
APH1AQ96BI3 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
APH1AQ96BI3 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
APH1AQ96BI3 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
APH1AQ96BI3 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
APH1AQ96BI3 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
APH1AQ96BI3 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
APH1AQ96BI3 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
APH1AQ96BI3 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.4■□□□□ 0.22
APH1AQ96BI3 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.4■□□□□ 0.22
APH1AQ96BI3 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
APH1AQ96BI3 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC16.4■□□□□ 0.22
APH1AQ96BI3 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
APH1AQ96BI3 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
APH1AQ96BI3 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
APH1AQ96BI3 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
APH1AQ96BI3 STARP1-201ENST00000397973 869 ntBASIC16.4■□□□□ 0.22
APH1AQ96BI3 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.4■□□□□ 0.22
APH1AQ96BI3 FAM8A6P-201ENST00000407496 1135 ntBASIC16.4■□□□□ 0.22
APH1AQ96BI3 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.4■□□□□ 0.22
APH1AQ96BI3 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.4■□□□□ 0.22
APH1AQ96BI3 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.4■□□□□ 0.22
APH1AQ96BI3 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.4■□□□□ 0.22
APH1AQ96BI3 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
APH1AQ96BI3 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.4■□□□□ 0.22
APH1AQ96BI3 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.4■□□□□ 0.22
APH1AQ96BI3 AC010240.3-201ENST00000607688 395 ntBASIC16.4■□□□□ 0.22
APH1AQ96BI3 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
APH1AQ96BI3 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.4■□□□□ 0.22
APH1AQ96BI3 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
APH1AQ96BI3 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
APH1AQ96BI3 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.4■□□□□ 0.22
APH1AQ96BI3 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
APH1AQ96BI3 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
APH1AQ96BI3 ANO7L1-203ENST00000602586 1720 ntBASIC16.39■□□□□ 0.21
APH1AQ96BI3 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
APH1AQ96BI3 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
APH1AQ96BI3 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
APH1AQ96BI3 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
APH1AQ96BI3 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
APH1AQ96BI3 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
APH1AQ96BI3 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
APH1AQ96BI3 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
APH1AQ96BI3 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.39■□□□□ 0.21
APH1AQ96BI3 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
APH1AQ96BI3 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.39■□□□□ 0.21
APH1AQ96BI3 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.39■□□□□ 0.21
APH1AQ96BI3 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
APH1AQ96BI3 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.39■□□□□ 0.21
APH1AQ96BI3 MIR3180-4-201ENST00000582223 153 ntBASIC16.39■□□□□ 0.21
APH1AQ96BI3 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.39■□□□□ 0.21
APH1AQ96BI3 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.39■□□□□ 0.21
APH1AQ96BI3 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
APH1AQ96BI3 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.39■□□□□ 0.21
APH1AQ96BI3 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.39■□□□□ 0.21
APH1AQ96BI3 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
APH1AQ96BI3 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
APH1AQ96BI3 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
APH1AQ96BI3 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
APH1AQ96BI3 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.39■□□□□ 0.21
APH1AQ96BI3 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.39■□□□□ 0.21
APH1AQ96BI3 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
APH1AQ96BI3 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
APH1AQ96BI3 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
APH1AQ96BI3 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
APH1AQ96BI3 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.38■□□□□ 0.21
APH1AQ96BI3 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
APH1AQ96BI3 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
APH1AQ96BI3 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
APH1AQ96BI3 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.38■□□□□ 0.21
APH1AQ96BI3 KRT8P50-201ENST00000562022 1438 ntBASIC16.38■□□□□ 0.21
APH1AQ96BI3 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
APH1AQ96BI3 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
APH1AQ96BI3 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
APH1AQ96BI3 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
APH1AQ96BI3 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
APH1AQ96BI3 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
APH1AQ96BI3 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
APH1AQ96BI3 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.38■□□□□ 0.21
APH1AQ96BI3 RASA4DP-201ENST00000460726 1199 ntBASIC16.38■□□□□ 0.21
APH1AQ96BI3 MIR3917-201ENST00000580971 93 ntBASIC16.38■□□□□ 0.21
APH1AQ96BI3 NTF6B-201ENST00000591913 560 ntBASIC16.38■□□□□ 0.21
APH1AQ96BI3 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
APH1AQ96BI3 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
APH1AQ96BI3 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
APH1AQ96BI3 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
APH1AQ96BI3 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms