Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SH3KBP1Q96B97 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.34■□□□□ 0.53
SH3KBP1Q96B97 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SH3KBP1Q96B97 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SH3KBP1Q96B97 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SH3KBP1Q96B97 AC009947.2-201ENST00000444014 672 ntBASIC18.34■□□□□ 0.53
SH3KBP1Q96B97 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.34■□□□□ 0.53
SH3KBP1Q96B97 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
SH3KBP1Q96B97 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SH3KBP1Q96B97 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SH3KBP1Q96B97 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SH3KBP1Q96B97 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
SH3KBP1Q96B97 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SH3KBP1Q96B97 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SH3KBP1Q96B97 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SH3KBP1Q96B97 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SH3KBP1Q96B97 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SH3KBP1Q96B97 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SH3KBP1Q96B97 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SH3KBP1Q96B97 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
SH3KBP1Q96B97 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SH3KBP1Q96B97 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.33■□□□□ 0.53
SH3KBP1Q96B97 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SH3KBP1Q96B97 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SH3KBP1Q96B97 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SH3KBP1Q96B97 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
SH3KBP1Q96B97 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
SH3KBP1Q96B97 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SH3KBP1Q96B97 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SH3KBP1Q96B97 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SH3KBP1Q96B97 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
SH3KBP1Q96B97 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.33■□□□□ 0.52
SH3KBP1Q96B97 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.33■□□□□ 0.52
SH3KBP1Q96B97 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.33■□□□□ 0.52
SH3KBP1Q96B97 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SH3KBP1Q96B97 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.33■□□□□ 0.52
SH3KBP1Q96B97 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SH3KBP1Q96B97 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SH3KBP1Q96B97 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SH3KBP1Q96B97 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.33■□□□□ 0.52
SH3KBP1Q96B97 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SH3KBP1Q96B97 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.33■□□□□ 0.52
SH3KBP1Q96B97 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
SH3KBP1Q96B97 AL023973.1-201ENST00000624619 620 ntBASIC18.33■□□□□ 0.52
SH3KBP1Q96B97 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SH3KBP1Q96B97 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SH3KBP1Q96B97 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
SH3KBP1Q96B97 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SH3KBP1Q96B97 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
SH3KBP1Q96B97 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.33■□□□□ 0.52
SH3KBP1Q96B97 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
SH3KBP1Q96B97 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.32■□□□□ 0.52
SH3KBP1Q96B97 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SH3KBP1Q96B97 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SH3KBP1Q96B97 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SH3KBP1Q96B97 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SH3KBP1Q96B97 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.32■□□□□ 0.52
SH3KBP1Q96B97 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.32■□□□□ 0.52
SH3KBP1Q96B97 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SH3KBP1Q96B97 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.32■□□□□ 0.52
SH3KBP1Q96B97 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
SH3KBP1Q96B97 AC008622.2-201ENST00000617006 1229 ntBASIC18.32■□□□□ 0.52
SH3KBP1Q96B97 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SH3KBP1Q96B97 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SH3KBP1Q96B97 CR769767.2-201ENST00000622735 460 ntBASIC18.32■□□□□ 0.52
SH3KBP1Q96B97 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.32■□□□□ 0.52
SH3KBP1Q96B97 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.32■□□□□ 0.52
SH3KBP1Q96B97 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SH3KBP1Q96B97 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SH3KBP1Q96B97 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.32■□□□□ 0.52
SH3KBP1Q96B97 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SH3KBP1Q96B97 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SH3KBP1Q96B97 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SH3KBP1Q96B97 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SH3KBP1Q96B97 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SH3KBP1Q96B97 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.31■□□□□ 0.52
SH3KBP1Q96B97 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SH3KBP1Q96B97 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.31■□□□□ 0.52
SH3KBP1Q96B97 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
SH3KBP1Q96B97 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.31■□□□□ 0.52
SH3KBP1Q96B97 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.31■□□□□ 0.52
SH3KBP1Q96B97 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SH3KBP1Q96B97 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SH3KBP1Q96B97 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SH3KBP1Q96B97 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SH3KBP1Q96B97 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SH3KBP1Q96B97 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SH3KBP1Q96B97 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.31■□□□□ 0.52
SH3KBP1Q96B97 MCCD1P1-208ENST00000445732 328 ntBASIC18.31■□□□□ 0.52
SH3KBP1Q96B97 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.31■□□□□ 0.52
SH3KBP1Q96B97 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.31■□□□□ 0.52
SH3KBP1Q96B97 AL441883.1-201ENST00000566170 1045 ntBASIC18.31■□□□□ 0.52
SH3KBP1Q96B97 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.31■□□□□ 0.52
SH3KBP1Q96B97 MIR4674-201ENST00000582457 87 ntBASIC18.31■□□□□ 0.52
SH3KBP1Q96B97 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SH3KBP1Q96B97 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SH3KBP1Q96B97 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SH3KBP1Q96B97 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SH3KBP1Q96B97 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SH3KBP1Q96B97 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms