Protein–RNA interactions for Protein: Q969G3

SMARCE1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1Q969G3 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMARCE1Q969G3 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
SMARCE1Q969G3 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.88■□□□□ 0.93
SMARCE1Q969G3 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMARCE1Q969G3 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMARCE1Q969G3 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
SMARCE1Q969G3 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SMARCE1Q969G3 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.88■□□□□ 0.93
SMARCE1Q969G3 B3GAT3P1-201ENST00000471720 806 ntBASIC20.88■□□□□ 0.93
SMARCE1Q969G3 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.88■□□□□ 0.93
SMARCE1Q969G3 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.88■□□□□ 0.93
SMARCE1Q969G3 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.88■□□□□ 0.93
SMARCE1Q969G3 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMARCE1Q969G3 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMARCE1Q969G3 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC20.88■□□□□ 0.93
SMARCE1Q969G3 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC20.88■□□□□ 0.93
SMARCE1Q969G3 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMARCE1Q969G3 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SMARCE1Q969G3 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMARCE1Q969G3 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC20.88■□□□□ 0.93
SMARCE1Q969G3 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMARCE1Q969G3 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.88■□□□□ 0.93
SMARCE1Q969G3 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMARCE1Q969G3 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
SMARCE1Q969G3 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMARCE1Q969G3 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC20.87■□□□□ 0.93
SMARCE1Q969G3 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.87■□□□□ 0.93
SMARCE1Q969G3 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
SMARCE1Q969G3 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.87■□□□□ 0.93
SMARCE1Q969G3 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMARCE1Q969G3 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SMARCE1Q969G3 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMARCE1Q969G3 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMARCE1Q969G3 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SMARCE1Q969G3 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.87■□□□□ 0.93
SMARCE1Q969G3 AP000997.3-201ENST00000623333 2250 ntBASIC20.87■□□□□ 0.93
SMARCE1Q969G3 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMARCE1Q969G3 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
SMARCE1Q969G3 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMARCE1Q969G3 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC20.86■□□□□ 0.93
SMARCE1Q969G3 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.86■□□□□ 0.93
SMARCE1Q969G3 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC20.86■□□□□ 0.93
SMARCE1Q969G3 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMARCE1Q969G3 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SMARCE1Q969G3 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMARCE1Q969G3 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SMARCE1Q969G3 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SMARCE1Q969G3 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SMARCE1Q969G3 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.86■□□□□ 0.93
SMARCE1Q969G3 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMARCE1Q969G3 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
SMARCE1Q969G3 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.86■□□□□ 0.93
SMARCE1Q969G3 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.86■□□□□ 0.93
SMARCE1Q969G3 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SMARCE1Q969G3 FAM197Y4-202ENST00000622692 608 ntBASIC20.86■□□□□ 0.93
SMARCE1Q969G3 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC20.86■□□□□ 0.93
SMARCE1Q969G3 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.86■□□□□ 0.93
SMARCE1Q969G3 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.86■□□□□ 0.93
SMARCE1Q969G3 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
SMARCE1Q969G3 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
SMARCE1Q969G3 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMARCE1Q969G3 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC20.86■□□□□ 0.93
SMARCE1Q969G3 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMARCE1Q969G3 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMARCE1Q969G3 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
SMARCE1Q969G3 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC20.86■□□□□ 0.93
SMARCE1Q969G3 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMARCE1Q969G3 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMARCE1Q969G3 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.85■□□□□ 0.93
SMARCE1Q969G3 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMARCE1Q969G3 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMARCE1Q969G3 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC20.85■□□□□ 0.93
SMARCE1Q969G3 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
SMARCE1Q969G3 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMARCE1Q969G3 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
SMARCE1Q969G3 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.85■□□□□ 0.93
SMARCE1Q969G3 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
SMARCE1Q969G3 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
SMARCE1Q969G3 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SMARCE1Q969G3 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.85■□□□□ 0.93
SMARCE1Q969G3 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SMARCE1Q969G3 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.85■□□□□ 0.93
SMARCE1Q969G3 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.85■□□□□ 0.93
SMARCE1Q969G3 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
SMARCE1Q969G3 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.85■□□□□ 0.93
SMARCE1Q969G3 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC20.85■□□□□ 0.93
SMARCE1Q969G3 AC068880.1-201ENST00000507289 2297 ntBASIC20.85■□□□□ 0.93
SMARCE1Q969G3 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC20.85■□□□□ 0.93
SMARCE1Q969G3 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMARCE1Q969G3 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
SMARCE1Q969G3 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
SMARCE1Q969G3 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SMARCE1Q969G3 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC20.85■□□□□ 0.93
SMARCE1Q969G3 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SMARCE1Q969G3 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.84■□□□□ 0.93
SMARCE1Q969G3 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.84■□□□□ 0.93
SMARCE1Q969G3 AC135776.1-201ENST00000319817 2481 ntBASIC20.84■□□□□ 0.93
SMARCE1Q969G3 FSCN1P1-201ENST00000568912 1481 ntBASIC20.84■□□□□ 0.93
SMARCE1Q969G3 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
SMARCE1Q969G3 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms