Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HPS1Q92902 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HPS1Q92902 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
HPS1Q92902 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
HPS1Q92902 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC16.92■□□□□ 0.3
HPS1Q92902 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC16.92■□□□□ 0.3
HPS1Q92902 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC16.92■□□□□ 0.3
HPS1Q92902 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HPS1Q92902 AC008764.6-201ENST00000595909 2069 ntBASIC16.92■□□□□ 0.3
HPS1Q92902 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HPS1Q92902 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
HPS1Q92902 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HPS1Q92902 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HPS1Q92902 AC126763.1-201ENST00000552015 2118 ntBASIC16.91■□□□□ 0.3
HPS1Q92902 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.91■□□□□ 0.3
HPS1Q92902 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HPS1Q92902 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
HPS1Q92902 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
HPS1Q92902 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.91■□□□□ 0.3
HPS1Q92902 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HPS1Q92902 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HPS1Q92902 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HPS1Q92902 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HPS1Q92902 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HPS1Q92902 KRT8P17-201ENST00000453110 1448 ntBASIC16.91■□□□□ 0.3
HPS1Q92902 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HPS1Q92902 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HPS1Q92902 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
HPS1Q92902 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC16.91■□□□□ 0.3
HPS1Q92902 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
HPS1Q92902 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HPS1Q92902 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.91■□□□□ 0.3
HPS1Q92902 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HPS1Q92902 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HPS1Q92902 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.91■□□□□ 0.3
HPS1Q92902 AL162727.3-201ENST00000635661 2787 ntBASIC16.91■□□□□ 0.3
HPS1Q92902 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HPS1Q92902 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HPS1Q92902 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
HPS1Q92902 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.91■□□□□ 0.3
HPS1Q92902 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HPS1Q92902 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HPS1Q92902 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HPS1Q92902 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HPS1Q92902 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HPS1Q92902 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC16.9■□□□□ 0.3
HPS1Q92902 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HPS1Q92902 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.9■□□□□ 0.3
HPS1Q92902 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HPS1Q92902 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HPS1Q92902 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.9■□□□□ 0.3
HPS1Q92902 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HPS1Q92902 KRT16P6-202ENST00000425692 1426 ntBASIC16.9■□□□□ 0.3
HPS1Q92902 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HPS1Q92902 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
HPS1Q92902 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HPS1Q92902 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
HPS1Q92902 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HPS1Q92902 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HPS1Q92902 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HPS1Q92902 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
HPS1Q92902 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HPS1Q92902 ISG20-202ENST00000379224 540 ntTSL 3 BASIC16.9■□□□□ 0.3
HPS1Q92902 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HPS1Q92902 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HPS1Q92902 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC16.9■□□□□ 0.3
HPS1Q92902 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC16.9■□□□□ 0.3
HPS1Q92902 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC16.9■□□□□ 0.3
HPS1Q92902 AC233263.1-201ENST00000578059 224 ntBASIC16.9■□□□□ 0.3
HPS1Q92902 MIR4497-201ENST00000583208 89 ntBASIC16.9■□□□□ 0.3
HPS1Q92902 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
HPS1Q92902 AC073592.3-201ENST00000625118 1834 ntBASIC16.9■□□□□ 0.3
HPS1Q92902 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HPS1Q92902 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
HPS1Q92902 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HPS1Q92902 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HPS1Q92902 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HPS1Q92902 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
HPS1Q92902 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HPS1Q92902 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HPS1Q92902 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC16.89■□□□□ 0.3
HPS1Q92902 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.89■□□□□ 0.3
HPS1Q92902 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
HPS1Q92902 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.3
HPS1Q92902 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
HPS1Q92902 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HPS1Q92902 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.89■□□□□ 0.29
HPS1Q92902 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HPS1Q92902 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
HPS1Q92902 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HPS1Q92902 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
HPS1Q92902 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HPS1Q92902 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
HPS1Q92902 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
HPS1Q92902 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HPS1Q92902 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HPS1Q92902 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HPS1Q92902 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HPS1Q92902 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
HPS1Q92902 AC133681.1-201ENST00000465482 601 ntBASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms