Protein–RNA interactions for Protein: Q92743

HTRA1, Serine protease HTRA1, humanhuman

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA1Q92743 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
HTRA1Q92743 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HTRA1Q92743 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
HTRA1Q92743 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HTRA1Q92743 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HTRA1Q92743 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.09■□□□□ 0.33
HTRA1Q92743 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
HTRA1Q92743 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HTRA1Q92743 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HTRA1Q92743 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HTRA1Q92743 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.09■□□□□ 0.33
HTRA1Q92743 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HTRA1Q92743 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.09■□□□□ 0.33
HTRA1Q92743 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HTRA1Q92743 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
HTRA1Q92743 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
HTRA1Q92743 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
HTRA1Q92743 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HTRA1Q92743 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HTRA1Q92743 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.09■□□□□ 0.33
HTRA1Q92743 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
HTRA1Q92743 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HTRA1Q92743 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.09■□□□□ 0.33
HTRA1Q92743 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HTRA1Q92743 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.09■□□□□ 0.33
HTRA1Q92743 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
HTRA1Q92743 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.09■□□□□ 0.33
HTRA1Q92743 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.09■□□□□ 0.33
HTRA1Q92743 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.09■□□□□ 0.33
HTRA1Q92743 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
HTRA1Q92743 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HTRA1Q92743 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HTRA1Q92743 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.09■□□□□ 0.33
HTRA1Q92743 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.09■□□□□ 0.33
HTRA1Q92743 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
HTRA1Q92743 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HTRA1Q92743 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HTRA1Q92743 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
HTRA1Q92743 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HTRA1Q92743 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HTRA1Q92743 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
HTRA1Q92743 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
HTRA1Q92743 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HTRA1Q92743 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HTRA1Q92743 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HTRA1Q92743 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.08■□□□□ 0.33
HTRA1Q92743 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.08■□□□□ 0.33
HTRA1Q92743 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.08■□□□□ 0.33
HTRA1Q92743 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.08■□□□□ 0.33
HTRA1Q92743 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.08■□□□□ 0.33
HTRA1Q92743 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HTRA1Q92743 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HTRA1Q92743 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.08■□□□□ 0.33
HTRA1Q92743 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.08■□□□□ 0.33
HTRA1Q92743 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
HTRA1Q92743 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
HTRA1Q92743 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
HTRA1Q92743 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HTRA1Q92743 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.08■□□□□ 0.32
HTRA1Q92743 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.08■□□□□ 0.32
HTRA1Q92743 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.08■□□□□ 0.32
HTRA1Q92743 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HTRA1Q92743 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
HTRA1Q92743 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HTRA1Q92743 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
HTRA1Q92743 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
HTRA1Q92743 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.08■□□□□ 0.32
HTRA1Q92743 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HTRA1Q92743 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
HTRA1Q92743 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.08■□□□□ 0.32
HTRA1Q92743 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.08■□□□□ 0.32
HTRA1Q92743 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.08■□□□□ 0.32
HTRA1Q92743 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
HTRA1Q92743 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
HTRA1Q92743 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HTRA1Q92743 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HTRA1Q92743 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.08■□□□□ 0.32
HTRA1Q92743 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HTRA1Q92743 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.32
HTRA1Q92743 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HTRA1Q92743 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
HTRA1Q92743 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
HTRA1Q92743 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HTRA1Q92743 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
HTRA1Q92743 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HTRA1Q92743 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HTRA1Q92743 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HTRA1Q92743 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HTRA1Q92743 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HTRA1Q92743 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HTRA1Q92743 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
HTRA1Q92743 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
HTRA1Q92743 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.07■□□□□ 0.32
HTRA1Q92743 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HTRA1Q92743 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HTRA1Q92743 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HTRA1Q92743 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HTRA1Q92743 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HTRA1Q92743 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HTRA1Q92743 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms