Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ATL1Q8WXF7 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.08■□□□□ 0.48
ATL1Q8WXF7 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.07■□□□□ 0.48
ATL1Q8WXF7 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATL1Q8WXF7 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATL1Q8WXF7 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.07■□□□□ 0.48
ATL1Q8WXF7 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
ATL1Q8WXF7 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATL1Q8WXF7 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.07■□□□□ 0.48
ATL1Q8WXF7 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.07■□□□□ 0.48
ATL1Q8WXF7 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
ATL1Q8WXF7 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATL1Q8WXF7 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.07■□□□□ 0.48
ATL1Q8WXF7 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.07■□□□□ 0.48
ATL1Q8WXF7 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.07■□□□□ 0.48
ATL1Q8WXF7 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
ATL1Q8WXF7 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ATL1Q8WXF7 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.07■□□□□ 0.48
ATL1Q8WXF7 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.07■□□□□ 0.48
ATL1Q8WXF7 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATL1Q8WXF7 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ATL1Q8WXF7 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.07■□□□□ 0.48
ATL1Q8WXF7 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.07■□□□□ 0.48
ATL1Q8WXF7 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.07■□□□□ 0.48
ATL1Q8WXF7 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.07■□□□□ 0.48
ATL1Q8WXF7 AC010947.1-201ENST00000623454 693 ntBASIC18.07■□□□□ 0.48
ATL1Q8WXF7 AC005332.8-201ENST00000622750 2735 ntBASIC18.07■□□□□ 0.48
ATL1Q8WXF7 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATL1Q8WXF7 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ATL1Q8WXF7 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATL1Q8WXF7 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATL1Q8WXF7 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ATL1Q8WXF7 AC036111.1-201ENST00000533973 1582 ntBASIC18.07■□□□□ 0.48
ATL1Q8WXF7 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
ATL1Q8WXF7 AL499627.1-201ENST00000569373 2188 ntBASIC18.07■□□□□ 0.48
ATL1Q8WXF7 CYP2D8P-201ENST00000433633 1490 ntBASIC18.07■□□□□ 0.48
ATL1Q8WXF7 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATL1Q8WXF7 AC126763.1-201ENST00000552015 2118 ntBASIC18.07■□□□□ 0.48
ATL1Q8WXF7 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATL1Q8WXF7 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATL1Q8WXF7 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATL1Q8WXF7 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.07■□□□□ 0.48
ATL1Q8WXF7 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.07■□□□□ 0.48
ATL1Q8WXF7 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
ATL1Q8WXF7 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATL1Q8WXF7 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATL1Q8WXF7 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATL1Q8WXF7 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATL1Q8WXF7 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
ATL1Q8WXF7 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
ATL1Q8WXF7 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.06■□□□□ 0.48
ATL1Q8WXF7 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATL1Q8WXF7 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
ATL1Q8WXF7 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATL1Q8WXF7 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
ATL1Q8WXF7 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.06■□□□□ 0.48
ATL1Q8WXF7 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ATL1Q8WXF7 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATL1Q8WXF7 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.06■□□□□ 0.48
ATL1Q8WXF7 CR769767.2-201ENST00000622735 460 ntBASIC18.06■□□□□ 0.48
ATL1Q8WXF7 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATL1Q8WXF7 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.06■□□□□ 0.48
ATL1Q8WXF7 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
ATL1Q8WXF7 AC020916.1-201ENST00000587762 1774 ntBASIC18.06■□□□□ 0.48
ATL1Q8WXF7 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.06■□□□□ 0.48
ATL1Q8WXF7 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATL1Q8WXF7 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATL1Q8WXF7 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ATL1Q8WXF7 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ATL1Q8WXF7 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATL1Q8WXF7 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATL1Q8WXF7 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
ATL1Q8WXF7 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ATL1Q8WXF7 HOXB1-202ENST00000577092 1414 ntBASIC18.06■□□□□ 0.48
ATL1Q8WXF7 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATL1Q8WXF7 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ATL1Q8WXF7 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATL1Q8WXF7 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATL1Q8WXF7 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATL1Q8WXF7 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ATL1Q8WXF7 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATL1Q8WXF7 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATL1Q8WXF7 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.05■□□□□ 0.48
ATL1Q8WXF7 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATL1Q8WXF7 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
ATL1Q8WXF7 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATL1Q8WXF7 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATL1Q8WXF7 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
ATL1Q8WXF7 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATL1Q8WXF7 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.05■□□□□ 0.48
ATL1Q8WXF7 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATL1Q8WXF7 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.05■□□□□ 0.48
ATL1Q8WXF7 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATL1Q8WXF7 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.05■□□□□ 0.48
ATL1Q8WXF7 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.05■□□□□ 0.48
ATL1Q8WXF7 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATL1Q8WXF7 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ATL1Q8WXF7 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
ATL1Q8WXF7 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATL1Q8WXF7 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms