Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CKAP2Q8WWK9 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CKAP2Q8WWK9 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CKAP2Q8WWK9 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CKAP2Q8WWK9 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.4■□□□□ 0.54
CKAP2Q8WWK9 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.4■□□□□ 0.54
CKAP2Q8WWK9 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.4■□□□□ 0.54
CKAP2Q8WWK9 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CKAP2Q8WWK9 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
CKAP2Q8WWK9 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CKAP2Q8WWK9 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CKAP2Q8WWK9 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CKAP2Q8WWK9 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CKAP2Q8WWK9 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CKAP2Q8WWK9 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CKAP2Q8WWK9 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
CKAP2Q8WWK9 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CKAP2Q8WWK9 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.4■□□□□ 0.54
CKAP2Q8WWK9 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CKAP2Q8WWK9 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CKAP2Q8WWK9 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
CKAP2Q8WWK9 NKILA-202ENST00000614771 2598 ntBASIC18.39■□□□□ 0.54
CKAP2Q8WWK9 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CKAP2Q8WWK9 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CKAP2Q8WWK9 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CKAP2Q8WWK9 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CKAP2Q8WWK9 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CKAP2Q8WWK9 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CKAP2Q8WWK9 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.39■□□□□ 0.53
CKAP2Q8WWK9 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CKAP2Q8WWK9 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CKAP2Q8WWK9 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CKAP2Q8WWK9 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CKAP2Q8WWK9 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CKAP2Q8WWK9 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CKAP2Q8WWK9 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.39■□□□□ 0.53
CKAP2Q8WWK9 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.39■□□□□ 0.53
CKAP2Q8WWK9 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.39■□□□□ 0.53
CKAP2Q8WWK9 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
CKAP2Q8WWK9 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.39■□□□□ 0.53
CKAP2Q8WWK9 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CKAP2Q8WWK9 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CKAP2Q8WWK9 KRT8P3-201ENST00000519669 1449 ntBASIC18.39■□□□□ 0.53
CKAP2Q8WWK9 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CKAP2Q8WWK9 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CKAP2Q8WWK9 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CKAP2Q8WWK9 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.39■□□□□ 0.53
CKAP2Q8WWK9 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CKAP2Q8WWK9 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CKAP2Q8WWK9 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.38■□□□□ 0.53
CKAP2Q8WWK9 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CKAP2Q8WWK9 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CKAP2Q8WWK9 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CKAP2Q8WWK9 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CKAP2Q8WWK9 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CKAP2Q8WWK9 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.38■□□□□ 0.53
CKAP2Q8WWK9 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CKAP2Q8WWK9 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CKAP2Q8WWK9 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.38■□□□□ 0.53
CKAP2Q8WWK9 POU5F1P3-201ENST00000428824 1078 ntBASIC18.38■□□□□ 0.53
CKAP2Q8WWK9 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.38■□□□□ 0.53
CKAP2Q8WWK9 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.38■□□□□ 0.53
CKAP2Q8WWK9 AL121832.2-201ENST00000610979 668 ntBASIC18.38■□□□□ 0.53
CKAP2Q8WWK9 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CKAP2Q8WWK9 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.38■□□□□ 0.53
CKAP2Q8WWK9 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
CKAP2Q8WWK9 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.38■□□□□ 0.53
CKAP2Q8WWK9 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CKAP2Q8WWK9 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CKAP2Q8WWK9 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CKAP2Q8WWK9 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CKAP2Q8WWK9 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.38■□□□□ 0.53
CKAP2Q8WWK9 AP001094.4-201ENST00000579008 2176 ntBASIC18.38■□□□□ 0.53
CKAP2Q8WWK9 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CKAP2Q8WWK9 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CKAP2Q8WWK9 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CKAP2Q8WWK9 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CKAP2Q8WWK9 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.38■□□□□ 0.53
CKAP2Q8WWK9 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CKAP2Q8WWK9 AL023806.1-201ENST00000603994 1649 ntBASIC18.38■□□□□ 0.53
CKAP2Q8WWK9 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CKAP2Q8WWK9 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CKAP2Q8WWK9 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CKAP2Q8WWK9 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.37■□□□□ 0.53
CKAP2Q8WWK9 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CKAP2Q8WWK9 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CKAP2Q8WWK9 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CKAP2Q8WWK9 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CKAP2Q8WWK9 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.37■□□□□ 0.53
CKAP2Q8WWK9 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CKAP2Q8WWK9 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CKAP2Q8WWK9 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.37■□□□□ 0.53
CKAP2Q8WWK9 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.37■□□□□ 0.53
CKAP2Q8WWK9 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CKAP2Q8WWK9 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CKAP2Q8WWK9 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.37■□□□□ 0.53
CKAP2Q8WWK9 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CKAP2Q8WWK9 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.37■□□□□ 0.53
CKAP2Q8WWK9 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.37■□□□□ 0.53
CKAP2Q8WWK9 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms