Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
SMIM4Q8WVI0 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SMIM4Q8WVI0 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SMIM4Q8WVI0 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SMIM4Q8WVI0 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
SMIM4Q8WVI0 AL096828.2-201ENST00000567259 1965 ntBASIC15.83■□□□□ 0.12
SMIM4Q8WVI0 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
SMIM4Q8WVI0 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SMIM4Q8WVI0 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
SMIM4Q8WVI0 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SMIM4Q8WVI0 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.83■□□□□ 0.12
SMIM4Q8WVI0 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SMIM4Q8WVI0 AL118508.1-201ENST00000613502 2345 ntBASIC15.83■□□□□ 0.12
SMIM4Q8WVI0 AL121761.2-201ENST00000598007 1648 ntBASIC15.83■□□□□ 0.12
SMIM4Q8WVI0 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SMIM4Q8WVI0 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
SMIM4Q8WVI0 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
SMIM4Q8WVI0 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SMIM4Q8WVI0 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
SMIM4Q8WVI0 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SMIM4Q8WVI0 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SMIM4Q8WVI0 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SMIM4Q8WVI0 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
SMIM4Q8WVI0 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
SMIM4Q8WVI0 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC15.82■□□□□ 0.12
SMIM4Q8WVI0 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC15.82■□□□□ 0.12
SMIM4Q8WVI0 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SMIM4Q8WVI0 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.82■□□□□ 0.12
SMIM4Q8WVI0 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
SMIM4Q8WVI0 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SMIM4Q8WVI0 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SMIM4Q8WVI0 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SMIM4Q8WVI0 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SMIM4Q8WVI0 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SMIM4Q8WVI0 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC15.82■□□□□ 0.12
SMIM4Q8WVI0 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SMIM4Q8WVI0 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
SMIM4Q8WVI0 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SMIM4Q8WVI0 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
SMIM4Q8WVI0 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
SMIM4Q8WVI0 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SMIM4Q8WVI0 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC15.82■□□□□ 0.12
SMIM4Q8WVI0 AC137761.2-201ENST00000561729 223 ntBASIC15.82■□□□□ 0.12
SMIM4Q8WVI0 AC145350.3-201ENST00000569033 163 ntBASIC15.82■□□□□ 0.12
SMIM4Q8WVI0 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC15.82■□□□□ 0.12
SMIM4Q8WVI0 AC005837.3-201ENST00000612163 286 ntBASIC15.82■□□□□ 0.12
SMIM4Q8WVI0 AC006557.6-201ENST00000623071 864 ntBASIC15.82■□□□□ 0.12
SMIM4Q8WVI0 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SMIM4Q8WVI0 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC15.82■□□□□ 0.12
SMIM4Q8WVI0 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
SMIM4Q8WVI0 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.82■□□□□ 0.12
SMIM4Q8WVI0 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SMIM4Q8WVI0 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.82■□□□□ 0.12
SMIM4Q8WVI0 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
SMIM4Q8WVI0 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
SMIM4Q8WVI0 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SMIM4Q8WVI0 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SMIM4Q8WVI0 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SMIM4Q8WVI0 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SMIM4Q8WVI0 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
SMIM4Q8WVI0 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SMIM4Q8WVI0 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SMIM4Q8WVI0 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.81■□□□□ 0.12
SMIM4Q8WVI0 MFF-205ENST00000354503 1085 ntTSL 2 BASIC15.81■□□□□ 0.12
SMIM4Q8WVI0 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SMIM4Q8WVI0 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SMIM4Q8WVI0 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC15.81■□□□□ 0.12
SMIM4Q8WVI0 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SMIM4Q8WVI0 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.81■□□□□ 0.12
SMIM4Q8WVI0 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC15.81■□□□□ 0.12
SMIM4Q8WVI0 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
SMIM4Q8WVI0 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SMIM4Q8WVI0 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SMIM4Q8WVI0 AL160286.2-201ENST00000567150 934 ntBASIC15.81■□□□□ 0.12
SMIM4Q8WVI0 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
SMIM4Q8WVI0 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SMIM4Q8WVI0 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SMIM4Q8WVI0 PARP1-210ENST00000629232 477 ntTSL 5 BASIC15.81■□□□□ 0.12
SMIM4Q8WVI0 LINC00602-201ENST00000629776 2065 ntBASIC15.81■□□□□ 0.12
SMIM4Q8WVI0 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC15.81■□□□□ 0.12
SMIM4Q8WVI0 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC15.81■□□□□ 0.12
SMIM4Q8WVI0 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SMIM4Q8WVI0 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
SMIM4Q8WVI0 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC15.81■□□□□ 0.12
SMIM4Q8WVI0 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC15.81■□□□□ 0.12
SMIM4Q8WVI0 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SMIM4Q8WVI0 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SMIM4Q8WVI0 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.8■□□□□ 0.12
SMIM4Q8WVI0 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SMIM4Q8WVI0 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC15.8■□□□□ 0.12
SMIM4Q8WVI0 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SMIM4Q8WVI0 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SMIM4Q8WVI0 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
SMIM4Q8WVI0 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SMIM4Q8WVI0 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.8■□□□□ 0.12
SMIM4Q8WVI0 MYLKP1-201ENST00000509077 1580 ntBASIC15.8■□□□□ 0.12
SMIM4Q8WVI0 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SMIM4Q8WVI0 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SMIM4Q8WVI0 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.8■□□□□ 0.12
SMIM4Q8WVI0 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms