Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRAF3IP1Q8TDR0 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRAF3IP1Q8TDR0 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRAF3IP1Q8TDR0 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.32■□□□□ 0.68
TRAF3IP1Q8TDR0 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRAF3IP1Q8TDR0 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRAF3IP1Q8TDR0 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRAF3IP1Q8TDR0 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRAF3IP1Q8TDR0 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
TRAF3IP1Q8TDR0 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
TRAF3IP1Q8TDR0 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.32■□□□□ 0.68
TRAF3IP1Q8TDR0 CA15P1-201ENST00000481698 905 ntBASIC19.32■□□□□ 0.68
TRAF3IP1Q8TDR0 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.32■□□□□ 0.68
TRAF3IP1Q8TDR0 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.32■□□□□ 0.68
TRAF3IP1Q8TDR0 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.32■□□□□ 0.68
TRAF3IP1Q8TDR0 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.32■□□□□ 0.68
TRAF3IP1Q8TDR0 AC008622.2-201ENST00000617006 1229 ntBASIC19.32■□□□□ 0.68
TRAF3IP1Q8TDR0 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
TRAF3IP1Q8TDR0 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRAF3IP1Q8TDR0 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRAF3IP1Q8TDR0 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.32■□□□□ 0.68
TRAF3IP1Q8TDR0 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRAF3IP1Q8TDR0 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRAF3IP1Q8TDR0 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRAF3IP1Q8TDR0 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRAF3IP1Q8TDR0 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.31■□□□□ 0.68
TRAF3IP1Q8TDR0 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRAF3IP1Q8TDR0 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRAF3IP1Q8TDR0 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.31■□□□□ 0.68
TRAF3IP1Q8TDR0 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRAF3IP1Q8TDR0 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.31■□□□□ 0.68
TRAF3IP1Q8TDR0 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
TRAF3IP1Q8TDR0 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.31■□□□□ 0.68
TRAF3IP1Q8TDR0 UNC93B2-201ENST00000285383 730 ntBASIC19.31■□□□□ 0.68
TRAF3IP1Q8TDR0 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
TRAF3IP1Q8TDR0 TSPY7P-201ENST00000431358 1114 ntBASIC19.31■□□□□ 0.68
TRAF3IP1Q8TDR0 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRAF3IP1Q8TDR0 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRAF3IP1Q8TDR0 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.31■□□□□ 0.68
TRAF3IP1Q8TDR0 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.31■□□□□ 0.68
TRAF3IP1Q8TDR0 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.31■□□□□ 0.68
TRAF3IP1Q8TDR0 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.31■□□□□ 0.68
TRAF3IP1Q8TDR0 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRAF3IP1Q8TDR0 KRT8P45-201ENST00000414328 1447 ntBASIC19.31■□□□□ 0.68
TRAF3IP1Q8TDR0 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRAF3IP1Q8TDR0 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
TRAF3IP1Q8TDR0 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRAF3IP1Q8TDR0 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRAF3IP1Q8TDR0 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRAF3IP1Q8TDR0 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.31■□□□□ 0.68
TRAF3IP1Q8TDR0 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
TRAF3IP1Q8TDR0 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
TRAF3IP1Q8TDR0 AC135050.7-201ENST00000624508 2218 ntBASIC19.31■□□□□ 0.68
TRAF3IP1Q8TDR0 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.3■□□□□ 0.68
TRAF3IP1Q8TDR0 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
TRAF3IP1Q8TDR0 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAF3IP1Q8TDR0 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAF3IP1Q8TDR0 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAF3IP1Q8TDR0 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.3■□□□□ 0.68
TRAF3IP1Q8TDR0 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRAF3IP1Q8TDR0 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRAF3IP1Q8TDR0 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAF3IP1Q8TDR0 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAF3IP1Q8TDR0 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC19.3■□□□□ 0.68
TRAF3IP1Q8TDR0 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAF3IP1Q8TDR0 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAF3IP1Q8TDR0 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRAF3IP1Q8TDR0 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.3■□□□□ 0.68
TRAF3IP1Q8TDR0 AL023284.2-201ENST00000405850 579 ntBASIC19.3■□□□□ 0.68
TRAF3IP1Q8TDR0 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRAF3IP1Q8TDR0 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.3■□□□□ 0.68
TRAF3IP1Q8TDR0 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRAF3IP1Q8TDR0 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.3■□□□□ 0.68
TRAF3IP1Q8TDR0 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
TRAF3IP1Q8TDR0 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAF3IP1Q8TDR0 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.3■□□□□ 0.68
TRAF3IP1Q8TDR0 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAF3IP1Q8TDR0 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
TRAF3IP1Q8TDR0 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
TRAF3IP1Q8TDR0 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.3■□□□□ 0.68
TRAF3IP1Q8TDR0 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.3■□□□□ 0.68
TRAF3IP1Q8TDR0 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAF3IP1Q8TDR0 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAF3IP1Q8TDR0 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAF3IP1Q8TDR0 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
TRAF3IP1Q8TDR0 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.3■□□□□ 0.68
TRAF3IP1Q8TDR0 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRAF3IP1Q8TDR0 GPAT2P1-201ENST00000444924 1672 ntBASIC19.3■□□□□ 0.68
TRAF3IP1Q8TDR0 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRAF3IP1Q8TDR0 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAF3IP1Q8TDR0 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAF3IP1Q8TDR0 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRAF3IP1Q8TDR0 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.29■□□□□ 0.68
TRAF3IP1Q8TDR0 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRAF3IP1Q8TDR0 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
TRAF3IP1Q8TDR0 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
TRAF3IP1Q8TDR0 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC19.29■□□□□ 0.68
TRAF3IP1Q8TDR0 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.29■□□□□ 0.68
TRAF3IP1Q8TDR0 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRAF3IP1Q8TDR0 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms