Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CNIH3Q8TBE1 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CNIH3Q8TBE1 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC16.93■□□□□ 0.3
CNIH3Q8TBE1 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
CNIH3Q8TBE1 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNIH3Q8TBE1 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CNIH3Q8TBE1 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNIH3Q8TBE1 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CNIH3Q8TBE1 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CNIH3Q8TBE1 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNIH3Q8TBE1 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CNIH3Q8TBE1 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNIH3Q8TBE1 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CNIH3Q8TBE1 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CNIH3Q8TBE1 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CNIH3Q8TBE1 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.92■□□□□ 0.3
CNIH3Q8TBE1 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.92■□□□□ 0.3
CNIH3Q8TBE1 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.92■□□□□ 0.3
CNIH3Q8TBE1 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CNIH3Q8TBE1 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
CNIH3Q8TBE1 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CNIH3Q8TBE1 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CNIH3Q8TBE1 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CNIH3Q8TBE1 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.92■□□□□ 0.3
CNIH3Q8TBE1 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CNIH3Q8TBE1 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CNIH3Q8TBE1 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.92■□□□□ 0.3
CNIH3Q8TBE1 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.92■□□□□ 0.3
CNIH3Q8TBE1 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC16.92■□□□□ 0.3
CNIH3Q8TBE1 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CNIH3Q8TBE1 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CNIH3Q8TBE1 KRT8P45-201ENST00000414328 1447 ntBASIC16.92■□□□□ 0.3
CNIH3Q8TBE1 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CNIH3Q8TBE1 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
CNIH3Q8TBE1 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
CNIH3Q8TBE1 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CNIH3Q8TBE1 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CNIH3Q8TBE1 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CNIH3Q8TBE1 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CNIH3Q8TBE1 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CNIH3Q8TBE1 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.92■□□□□ 0.3
CNIH3Q8TBE1 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.92■□□□□ 0.3
CNIH3Q8TBE1 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CNIH3Q8TBE1 AL357033.4-201ENST00000617703 1807 ntBASIC16.91■□□□□ 0.3
CNIH3Q8TBE1 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.91■□□□□ 0.3
CNIH3Q8TBE1 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CNIH3Q8TBE1 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CNIH3Q8TBE1 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CNIH3Q8TBE1 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CNIH3Q8TBE1 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CNIH3Q8TBE1 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CNIH3Q8TBE1 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC16.91■□□□□ 0.3
CNIH3Q8TBE1 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CNIH3Q8TBE1 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CNIH3Q8TBE1 SERPINH1P1-201ENST00000419794 1249 ntBASIC16.91■□□□□ 0.3
CNIH3Q8TBE1 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CNIH3Q8TBE1 NME6-213ENST00000451657 871 ntTSL 2 BASIC16.91■□□□□ 0.3
CNIH3Q8TBE1 OR2A1-AS1-201ENST00000462305 773 ntBASIC16.91■□□□□ 0.3
CNIH3Q8TBE1 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC16.91■□□□□ 0.3
CNIH3Q8TBE1 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC16.91■□□□□ 0.3
CNIH3Q8TBE1 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC16.91■□□□□ 0.3
CNIH3Q8TBE1 PHB2-213ENST00000546111 858 ntTSL 2 BASIC16.91■□□□□ 0.3
CNIH3Q8TBE1 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC16.91■□□□□ 0.3
CNIH3Q8TBE1 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CNIH3Q8TBE1 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC16.91■□□□□ 0.3
CNIH3Q8TBE1 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CNIH3Q8TBE1 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CNIH3Q8TBE1 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CNIH3Q8TBE1 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CNIH3Q8TBE1 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CNIH3Q8TBE1 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CNIH3Q8TBE1 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CNIH3Q8TBE1 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CNIH3Q8TBE1 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.91■□□□□ 0.3
CNIH3Q8TBE1 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
CNIH3Q8TBE1 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.91■□□□□ 0.3
CNIH3Q8TBE1 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CNIH3Q8TBE1 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CNIH3Q8TBE1 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CNIH3Q8TBE1 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CNIH3Q8TBE1 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CNIH3Q8TBE1 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CNIH3Q8TBE1 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CNIH3Q8TBE1 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CNIH3Q8TBE1 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CNIH3Q8TBE1 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CNIH3Q8TBE1 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CNIH3Q8TBE1 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CNIH3Q8TBE1 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CNIH3Q8TBE1 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CNIH3Q8TBE1 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.9■□□□□ 0.3
CNIH3Q8TBE1 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CNIH3Q8TBE1 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CNIH3Q8TBE1 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CNIH3Q8TBE1 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC16.9■□□□□ 0.3
CNIH3Q8TBE1 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC16.9■□□□□ 0.3
CNIH3Q8TBE1 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CNIH3Q8TBE1 AL160286.2-201ENST00000567150 934 ntBASIC16.9■□□□□ 0.3
CNIH3Q8TBE1 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.9■□□□□ 0.3
CNIH3Q8TBE1 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms