Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRAM1L1Q8N609 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAM1L1Q8N609 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAM1L1Q8N609 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRAM1L1Q8N609 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAM1L1Q8N609 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.27■□□□□ 0.52
TRAM1L1Q8N609 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAM1L1Q8N609 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.27■□□□□ 0.52
TRAM1L1Q8N609 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAM1L1Q8N609 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
TRAM1L1Q8N609 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.27■□□□□ 0.52
TRAM1L1Q8N609 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAM1L1Q8N609 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.52
TRAM1L1Q8N609 LINC01311-201ENST00000565162 1445 ntBASIC18.27■□□□□ 0.52
TRAM1L1Q8N609 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAM1L1Q8N609 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
TRAM1L1Q8N609 AC092597.1-201ENST00000487352 616 ntBASIC18.27■□□□□ 0.52
TRAM1L1Q8N609 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.27■□□□□ 0.52
TRAM1L1Q8N609 KRT18P35-201ENST00000510488 1269 ntBASIC18.27■□□□□ 0.52
TRAM1L1Q8N609 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.27■□□□□ 0.52
TRAM1L1Q8N609 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.27■□□□□ 0.52
TRAM1L1Q8N609 AL136038.4-201ENST00000603606 1261 ntBASIC18.27■□□□□ 0.52
TRAM1L1Q8N609 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAM1L1Q8N609 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRAM1L1Q8N609 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
TRAM1L1Q8N609 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.27■□□□□ 0.51
TRAM1L1Q8N609 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
TRAM1L1Q8N609 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRAM1L1Q8N609 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TRAM1L1Q8N609 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.27■□□□□ 0.51
TRAM1L1Q8N609 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRAM1L1Q8N609 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRAM1L1Q8N609 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAM1L1Q8N609 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAM1L1Q8N609 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TRAM1L1Q8N609 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.26■□□□□ 0.51
TRAM1L1Q8N609 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TRAM1L1Q8N609 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAM1L1Q8N609 AL391807.1-203ENST00000604392 2365 ntBASIC18.26■□□□□ 0.51
TRAM1L1Q8N609 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.26■□□□□ 0.51
TRAM1L1Q8N609 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAM1L1Q8N609 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.26■□□□□ 0.51
TRAM1L1Q8N609 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAM1L1Q8N609 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.26■□□□□ 0.51
TRAM1L1Q8N609 HBZP1-201ENST00000354915 429 ntBASIC18.26■□□□□ 0.51
TRAM1L1Q8N609 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.26■□□□□ 0.51
TRAM1L1Q8N609 AL031133.1-201ENST00000406807 723 ntBASIC18.26■□□□□ 0.51
TRAM1L1Q8N609 HLA-F-220ENST00000434407 884 ntBASIC18.26■□□□□ 0.51
TRAM1L1Q8N609 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.26■□□□□ 0.51
TRAM1L1Q8N609 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAM1L1Q8N609 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
TRAM1L1Q8N609 AC087388.1-201ENST00000571370 1112 ntBASIC18.26■□□□□ 0.51
TRAM1L1Q8N609 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.26■□□□□ 0.51
TRAM1L1Q8N609 AL445228.2-201ENST00000605589 952 ntBASIC18.26■□□□□ 0.51
TRAM1L1Q8N609 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.26■□□□□ 0.51
TRAM1L1Q8N609 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRAM1L1Q8N609 SDHAP2-201ENST00000455183 2001 ntBASIC18.26■□□□□ 0.51
TRAM1L1Q8N609 WIZP1-201ENST00000531444 2299 ntBASIC18.26■□□□□ 0.51
TRAM1L1Q8N609 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAM1L1Q8N609 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAM1L1Q8N609 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
TRAM1L1Q8N609 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAM1L1Q8N609 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
TRAM1L1Q8N609 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRAM1L1Q8N609 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAM1L1Q8N609 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAM1L1Q8N609 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRAM1L1Q8N609 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRAM1L1Q8N609 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAM1L1Q8N609 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAM1L1Q8N609 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAM1L1Q8N609 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAM1L1Q8N609 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAM1L1Q8N609 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAM1L1Q8N609 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.25■□□□□ 0.51
TRAM1L1Q8N609 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAM1L1Q8N609 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAM1L1Q8N609 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRAM1L1Q8N609 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.25■□□□□ 0.51
TRAM1L1Q8N609 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.25■□□□□ 0.51
TRAM1L1Q8N609 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.25■□□□□ 0.51
TRAM1L1Q8N609 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.25■□□□□ 0.51
TRAM1L1Q8N609 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
TRAM1L1Q8N609 AC083849.1-201ENST00000615227 514 ntBASIC18.25■□□□□ 0.51
TRAM1L1Q8N609 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAM1L1Q8N609 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAM1L1Q8N609 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAM1L1Q8N609 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAM1L1Q8N609 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.25■□□□□ 0.51
TRAM1L1Q8N609 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
TRAM1L1Q8N609 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAM1L1Q8N609 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAM1L1Q8N609 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAM1L1Q8N609 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAM1L1Q8N609 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
TRAM1L1Q8N609 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.24■□□□□ 0.51
TRAM1L1Q8N609 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
TRAM1L1Q8N609 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAM1L1Q8N609 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAM1L1Q8N609 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms