Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC28.85■■■□□ 2.21
VPS8Q8N3P4 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC28.85■■■□□ 2.21
VPS8Q8N3P4 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
VPS8Q8N3P4 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
VPS8Q8N3P4 HCG4P8-203ENST00000443049 980 ntBASIC28.85■■■□□ 2.21
VPS8Q8N3P4 BX276092.5-203ENST00000456199 560 ntBASIC28.85■■■□□ 2.21
VPS8Q8N3P4 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC28.85■■■□□ 2.21
VPS8Q8N3P4 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC28.85■■■□□ 2.21
VPS8Q8N3P4 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC28.85■■■□□ 2.21
VPS8Q8N3P4 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
VPS8Q8N3P4 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
VPS8Q8N3P4 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
VPS8Q8N3P4 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
VPS8Q8N3P4 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC28.84■■■□□ 2.21
VPS8Q8N3P4 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
VPS8Q8N3P4 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
VPS8Q8N3P4 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
VPS8Q8N3P4 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
VPS8Q8N3P4 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC28.84■■■□□ 2.21
VPS8Q8N3P4 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
VPS8Q8N3P4 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC28.84■■■□□ 2.21
VPS8Q8N3P4 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC28.84■■■□□ 2.21
VPS8Q8N3P4 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
VPS8Q8N3P4 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC28.84■■■□□ 2.21
VPS8Q8N3P4 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC28.84■■■□□ 2.21
VPS8Q8N3P4 AL138781.2-201ENST00000617896 1843 ntBASIC28.84■■■□□ 2.21
VPS8Q8N3P4 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC28.83■■■□□ 2.21
VPS8Q8N3P4 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC28.83■■■□□ 2.21
VPS8Q8N3P4 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
VPS8Q8N3P4 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
VPS8Q8N3P4 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC28.83■■■□□ 2.21
VPS8Q8N3P4 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC28.83■■■□□ 2.21
VPS8Q8N3P4 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
VPS8Q8N3P4 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
VPS8Q8N3P4 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
VPS8Q8N3P4 PPIH-202ENST00000372549 327 ntTSL 3 BASIC28.83■■■□□ 2.21
VPS8Q8N3P4 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC28.83■■■□□ 2.21
VPS8Q8N3P4 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
VPS8Q8N3P4 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
VPS8Q8N3P4 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC28.83■■■□□ 2.21
VPS8Q8N3P4 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC28.83■■■□□ 2.21
VPS8Q8N3P4 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
VPS8Q8N3P4 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC28.83■■■□□ 2.2
VPS8Q8N3P4 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC28.82■■■□□ 2.2
VPS8Q8N3P4 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
VPS8Q8N3P4 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
VPS8Q8N3P4 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
VPS8Q8N3P4 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
VPS8Q8N3P4 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC28.82■■■□□ 2.2
VPS8Q8N3P4 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC28.82■■■□□ 2.2
VPS8Q8N3P4 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC28.82■■■□□ 2.2
VPS8Q8N3P4 AL845331.1-201ENST00000424978 1190 ntBASIC28.82■■■□□ 2.2
VPS8Q8N3P4 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC28.82■■■□□ 2.2
VPS8Q8N3P4 AL592071.1-201ENST00000611956 408 ntBASIC28.82■■■□□ 2.2
VPS8Q8N3P4 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC28.82■■■□□ 2.2
VPS8Q8N3P4 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC28.82■■■□□ 2.2
VPS8Q8N3P4 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC28.82■■■□□ 2.2
VPS8Q8N3P4 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
VPS8Q8N3P4 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC28.82■■■□□ 2.2
VPS8Q8N3P4 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
VPS8Q8N3P4 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC28.82■■■□□ 2.2
VPS8Q8N3P4 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC28.81■■■□□ 2.2
VPS8Q8N3P4 WIZP1-201ENST00000531444 2299 ntBASIC28.81■■■□□ 2.2
VPS8Q8N3P4 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
VPS8Q8N3P4 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
VPS8Q8N3P4 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC28.81■■■□□ 2.2
VPS8Q8N3P4 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC28.81■■■□□ 2.2
VPS8Q8N3P4 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC28.81■■■□□ 2.2
VPS8Q8N3P4 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC28.81■■■□□ 2.2
VPS8Q8N3P4 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC28.81■■■□□ 2.2
VPS8Q8N3P4 AP002414.4-201ENST00000589764 1148 ntBASIC28.81■■■□□ 2.2
VPS8Q8N3P4 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
VPS8Q8N3P4 AC092119.3-201ENST00000612618 583 ntBASIC28.81■■■□□ 2.2
VPS8Q8N3P4 GXYLT1P4-201ENST00000613576 1192 ntBASIC28.81■■■□□ 2.2
VPS8Q8N3P4 AL353692.3-201ENST00000407031 1396 ntBASIC28.81■■■□□ 2.2
VPS8Q8N3P4 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC28.81■■■□□ 2.2
VPS8Q8N3P4 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
VPS8Q8N3P4 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
VPS8Q8N3P4 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
VPS8Q8N3P4 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC28.8■■■□□ 2.2
VPS8Q8N3P4 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
VPS8Q8N3P4 DRAXINP1-201ENST00000437611 948 ntBASIC28.8■■■□□ 2.2
VPS8Q8N3P4 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC28.8■■■□□ 2.2
VPS8Q8N3P4 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC28.8■■■□□ 2.2
VPS8Q8N3P4 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC28.8■■■□□ 2.2
VPS8Q8N3P4 CIB2-208ENST00000560618 804 ntTSL 2 BASIC28.8■■■□□ 2.2
VPS8Q8N3P4 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
VPS8Q8N3P4 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC28.8■■■□□ 2.2
VPS8Q8N3P4 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC28.8■■■□□ 2.2
VPS8Q8N3P4 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
VPS8Q8N3P4 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC28.8■■■□□ 2.2
VPS8Q8N3P4 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
VPS8Q8N3P4 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC28.79■■■□□ 2.2
VPS8Q8N3P4 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
VPS8Q8N3P4 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
VPS8Q8N3P4 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC28.79■■■□□ 2.2
VPS8Q8N3P4 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC28.79■■■□□ 2.2
VPS8Q8N3P4 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC28.79■■■□□ 2.2
VPS8Q8N3P4 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
VPS8Q8N3P4 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms