Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VPS52Q8N1B4 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
VPS52Q8N1B4 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.05■□□□□ 0.8
VPS52Q8N1B4 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC20.05■□□□□ 0.8
VPS52Q8N1B4 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VPS52Q8N1B4 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
VPS52Q8N1B4 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.05■□□□□ 0.8
VPS52Q8N1B4 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
VPS52Q8N1B4 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VPS52Q8N1B4 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VPS52Q8N1B4 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
VPS52Q8N1B4 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
VPS52Q8N1B4 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
VPS52Q8N1B4 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
VPS52Q8N1B4 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
VPS52Q8N1B4 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC20.04■□□□□ 0.8
VPS52Q8N1B4 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VPS52Q8N1B4 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
VPS52Q8N1B4 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
VPS52Q8N1B4 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.04■□□□□ 0.8
VPS52Q8N1B4 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC20.04■□□□□ 0.8
VPS52Q8N1B4 SKP2-204ENST00000508514 821 ntTSL 3 BASIC20.04■□□□□ 0.8
VPS52Q8N1B4 SDHD-206ENST00000528182 754 ntTSL 3 BASIC20.04■□□□□ 0.8
VPS52Q8N1B4 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC20.04■□□□□ 0.8
VPS52Q8N1B4 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC20.04■□□□□ 0.8
VPS52Q8N1B4 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
VPS52Q8N1B4 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
VPS52Q8N1B4 AL157888.1-201ENST00000631930 593 ntBASIC20.04■□□□□ 0.8
VPS52Q8N1B4 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
VPS52Q8N1B4 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.04■□□□□ 0.8
VPS52Q8N1B4 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VPS52Q8N1B4 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VPS52Q8N1B4 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
VPS52Q8N1B4 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.04■□□□□ 0.8
VPS52Q8N1B4 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.04■□□□□ 0.8
VPS52Q8N1B4 AL162741.1-201ENST00000565563 1558 ntBASIC20.04■□□□□ 0.8
VPS52Q8N1B4 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
VPS52Q8N1B4 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
VPS52Q8N1B4 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VPS52Q8N1B4 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
VPS52Q8N1B4 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VPS52Q8N1B4 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
VPS52Q8N1B4 AC120498.9-201ENST00000339021 3867 ntBASIC20.03■□□□□ 0.8
VPS52Q8N1B4 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
VPS52Q8N1B4 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VPS52Q8N1B4 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
VPS52Q8N1B4 AC020763.4-201ENST00000623414 4170 ntBASIC20.03■□□□□ 0.8
VPS52Q8N1B4 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
VPS52Q8N1B4 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
VPS52Q8N1B4 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC20.03■□□□□ 0.8
VPS52Q8N1B4 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.03■□□□□ 0.8
VPS52Q8N1B4 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
VPS52Q8N1B4 MIR3180-1-201ENST00000580374 94 ntBASIC20.03■□□□□ 0.8
VPS52Q8N1B4 MIR3180-3-201ENST00000584616 94 ntBASIC20.03■□□□□ 0.8
VPS52Q8N1B4 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
VPS52Q8N1B4 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC20.03■□□□□ 0.8
VPS52Q8N1B4 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VPS52Q8N1B4 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
VPS52Q8N1B4 AP000974.1-201ENST00000623909 2387 ntBASIC20.03■□□□□ 0.8
VPS52Q8N1B4 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC20.03■□□□□ 0.8
VPS52Q8N1B4 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
VPS52Q8N1B4 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VPS52Q8N1B4 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VPS52Q8N1B4 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VPS52Q8N1B4 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC20.02■□□□□ 0.8
VPS52Q8N1B4 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
VPS52Q8N1B4 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VPS52Q8N1B4 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
VPS52Q8N1B4 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.02■□□□□ 0.8
VPS52Q8N1B4 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
VPS52Q8N1B4 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.8
VPS52Q8N1B4 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
VPS52Q8N1B4 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
VPS52Q8N1B4 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VPS52Q8N1B4 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
VPS52Q8N1B4 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.02■□□□□ 0.8
VPS52Q8N1B4 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VPS52Q8N1B4 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC20.02■□□□□ 0.8
VPS52Q8N1B4 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
VPS52Q8N1B4 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC20.02■□□□□ 0.8
VPS52Q8N1B4 HLA-F-220ENST00000434407 884 ntBASIC20.02■□□□□ 0.8
VPS52Q8N1B4 AP002383.4-201ENST00000442518 975 ntBASIC20.02■□□□□ 0.8
VPS52Q8N1B4 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
VPS52Q8N1B4 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC20.02■□□□□ 0.8
VPS52Q8N1B4 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.02■□□□□ 0.8
VPS52Q8N1B4 SPEG-225ENST00000617028 815 ntTSL 5 BASIC20.02■□□□□ 0.8
VPS52Q8N1B4 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
VPS52Q8N1B4 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.02■□□□□ 0.8
VPS52Q8N1B4 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VPS52Q8N1B4 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VPS52Q8N1B4 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
VPS52Q8N1B4 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.79
VPS52Q8N1B4 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
VPS52Q8N1B4 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
VPS52Q8N1B4 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
VPS52Q8N1B4 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
VPS52Q8N1B4 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
VPS52Q8N1B4 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
VPS52Q8N1B4 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
VPS52Q8N1B4 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms