Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.83■□□□□ 0.61
CHPFQ8IZ52 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
CHPFQ8IZ52 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CHPFQ8IZ52 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CHPFQ8IZ52 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
CHPFQ8IZ52 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.83■□□□□ 0.61
CHPFQ8IZ52 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CHPFQ8IZ52 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CHPFQ8IZ52 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CHPFQ8IZ52 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CHPFQ8IZ52 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
CHPFQ8IZ52 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CHPFQ8IZ52 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.83■□□□□ 0.6
CHPFQ8IZ52 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.83■□□□□ 0.6
CHPFQ8IZ52 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.83■□□□□ 0.6
CHPFQ8IZ52 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
CHPFQ8IZ52 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHPFQ8IZ52 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CHPFQ8IZ52 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CHPFQ8IZ52 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHPFQ8IZ52 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CHPFQ8IZ52 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CHPFQ8IZ52 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHPFQ8IZ52 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHPFQ8IZ52 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHPFQ8IZ52 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.82■□□□□ 0.6
CHPFQ8IZ52 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CHPFQ8IZ52 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHPFQ8IZ52 Z83836.1-201ENST00000624605 1642 ntBASIC18.82■□□□□ 0.6
CHPFQ8IZ52 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CHPFQ8IZ52 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.82■□□□□ 0.6
CHPFQ8IZ52 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHPFQ8IZ52 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.82■□□□□ 0.6
CHPFQ8IZ52 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHPFQ8IZ52 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.82■□□□□ 0.6
CHPFQ8IZ52 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHPFQ8IZ52 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CHPFQ8IZ52 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.82■□□□□ 0.6
CHPFQ8IZ52 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHPFQ8IZ52 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHPFQ8IZ52 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHPFQ8IZ52 PVRIG2P-201ENST00000435460 978 ntBASIC18.82■□□□□ 0.6
CHPFQ8IZ52 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.82■□□□□ 0.6
CHPFQ8IZ52 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.82■□□□□ 0.6
CHPFQ8IZ52 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.82■□□□□ 0.6
CHPFQ8IZ52 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.82■□□□□ 0.6
CHPFQ8IZ52 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.82■□□□□ 0.6
CHPFQ8IZ52 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CHPFQ8IZ52 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.82■□□□□ 0.6
CHPFQ8IZ52 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.82■□□□□ 0.6
CHPFQ8IZ52 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHPFQ8IZ52 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.82■□□□□ 0.6
CHPFQ8IZ52 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHPFQ8IZ52 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.82■□□□□ 0.6
CHPFQ8IZ52 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
CHPFQ8IZ52 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.81■□□□□ 0.6
CHPFQ8IZ52 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHPFQ8IZ52 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHPFQ8IZ52 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHPFQ8IZ52 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHPFQ8IZ52 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHPFQ8IZ52 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.81■□□□□ 0.6
CHPFQ8IZ52 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHPFQ8IZ52 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHPFQ8IZ52 AL032819.2-201ENST00000624543 2162 ntBASIC18.81■□□□□ 0.6
CHPFQ8IZ52 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHPFQ8IZ52 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.81■□□□□ 0.6
CHPFQ8IZ52 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHPFQ8IZ52 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHPFQ8IZ52 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHPFQ8IZ52 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHPFQ8IZ52 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.81■□□□□ 0.6
CHPFQ8IZ52 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHPFQ8IZ52 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.81■□□□□ 0.6
CHPFQ8IZ52 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHPFQ8IZ52 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.81■□□□□ 0.6
CHPFQ8IZ52 AP003733.1-201ENST00000491725 852 ntBASIC18.81■□□□□ 0.6
CHPFQ8IZ52 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CHPFQ8IZ52 MIR3180-4-201ENST00000582223 153 ntBASIC18.81■□□□□ 0.6
CHPFQ8IZ52 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.81■□□□□ 0.6
CHPFQ8IZ52 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHPFQ8IZ52 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHPFQ8IZ52 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHPFQ8IZ52 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHPFQ8IZ52 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHPFQ8IZ52 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.81■□□□□ 0.6
CHPFQ8IZ52 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHPFQ8IZ52 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CHPFQ8IZ52 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHPFQ8IZ52 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CHPFQ8IZ52 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHPFQ8IZ52 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
CHPFQ8IZ52 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHPFQ8IZ52 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHPFQ8IZ52 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.8■□□□□ 0.6
CHPFQ8IZ52 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.8■□□□□ 0.6
CHPFQ8IZ52 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.8■□□□□ 0.6
CHPFQ8IZ52 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CHPFQ8IZ52 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.8■□□□□ 0.6
CHPFQ8IZ52 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms