Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.06■□□□□ 0.32
C9orf40Q8IXQ3 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
C9orf40Q8IXQ3 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
C9orf40Q8IXQ3 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.06■□□□□ 0.32
C9orf40Q8IXQ3 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
C9orf40Q8IXQ3 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
C9orf40Q8IXQ3 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
C9orf40Q8IXQ3 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
C9orf40Q8IXQ3 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
C9orf40Q8IXQ3 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
C9orf40Q8IXQ3 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
C9orf40Q8IXQ3 PVRIG2P-201ENST00000435460 978 ntBASIC17.06■□□□□ 0.32
C9orf40Q8IXQ3 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.06■□□□□ 0.32
C9orf40Q8IXQ3 SPDYE13P-201ENST00000445314 798 ntBASIC17.06■□□□□ 0.32
C9orf40Q8IXQ3 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.06■□□□□ 0.32
C9orf40Q8IXQ3 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.06■□□□□ 0.32
C9orf40Q8IXQ3 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.06■□□□□ 0.32
C9orf40Q8IXQ3 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
C9orf40Q8IXQ3 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.06■□□□□ 0.32
C9orf40Q8IXQ3 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.06■□□□□ 0.32
C9orf40Q8IXQ3 AL136038.4-201ENST00000603606 1261 ntBASIC17.06■□□□□ 0.32
C9orf40Q8IXQ3 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
C9orf40Q8IXQ3 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
C9orf40Q8IXQ3 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
C9orf40Q8IXQ3 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.06■□□□□ 0.32
C9orf40Q8IXQ3 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
C9orf40Q8IXQ3 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
C9orf40Q8IXQ3 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
C9orf40Q8IXQ3 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.06■□□□□ 0.32
C9orf40Q8IXQ3 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
C9orf40Q8IXQ3 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.06■□□□□ 0.32
C9orf40Q8IXQ3 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.06■□□□□ 0.32
C9orf40Q8IXQ3 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
C9orf40Q8IXQ3 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.06■□□□□ 0.32
C9orf40Q8IXQ3 SDHAP2-201ENST00000455183 2001 ntBASIC17.06■□□□□ 0.32
C9orf40Q8IXQ3 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
C9orf40Q8IXQ3 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
C9orf40Q8IXQ3 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
C9orf40Q8IXQ3 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
C9orf40Q8IXQ3 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
C9orf40Q8IXQ3 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.05■□□□□ 0.32
C9orf40Q8IXQ3 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
C9orf40Q8IXQ3 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.05■□□□□ 0.32
C9orf40Q8IXQ3 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
C9orf40Q8IXQ3 HLA-F-220ENST00000434407 884 ntBASIC17.05■□□□□ 0.32
C9orf40Q8IXQ3 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.05■□□□□ 0.32
C9orf40Q8IXQ3 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.05■□□□□ 0.32
C9orf40Q8IXQ3 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.05■□□□□ 0.32
C9orf40Q8IXQ3 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.05■□□□□ 0.32
C9orf40Q8IXQ3 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.05■□□□□ 0.32
C9orf40Q8IXQ3 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.05■□□□□ 0.32
C9orf40Q8IXQ3 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
C9orf40Q8IXQ3 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
C9orf40Q8IXQ3 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
C9orf40Q8IXQ3 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.05■□□□□ 0.32
C9orf40Q8IXQ3 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.05■□□□□ 0.32
C9orf40Q8IXQ3 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.05■□□□□ 0.32
C9orf40Q8IXQ3 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
C9orf40Q8IXQ3 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
C9orf40Q8IXQ3 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
C9orf40Q8IXQ3 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
C9orf40Q8IXQ3 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
C9orf40Q8IXQ3 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.04■□□□□ 0.32
C9orf40Q8IXQ3 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
C9orf40Q8IXQ3 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
C9orf40Q8IXQ3 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
C9orf40Q8IXQ3 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
C9orf40Q8IXQ3 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
C9orf40Q8IXQ3 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
C9orf40Q8IXQ3 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
C9orf40Q8IXQ3 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
C9orf40Q8IXQ3 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
C9orf40Q8IXQ3 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.04■□□□□ 0.32
C9orf40Q8IXQ3 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
C9orf40Q8IXQ3 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.04■□□□□ 0.32
C9orf40Q8IXQ3 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
C9orf40Q8IXQ3 VENTXP5-201ENST00000523979 775 ntBASIC17.04■□□□□ 0.32
C9orf40Q8IXQ3 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.04■□□□□ 0.32
C9orf40Q8IXQ3 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.04■□□□□ 0.32
C9orf40Q8IXQ3 ZNF444P1-201ENST00000559497 298 ntBASIC17.04■□□□□ 0.32
C9orf40Q8IXQ3 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.04■□□□□ 0.32
C9orf40Q8IXQ3 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.04■□□□□ 0.32
C9orf40Q8IXQ3 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
C9orf40Q8IXQ3 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
C9orf40Q8IXQ3 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.04■□□□□ 0.32
C9orf40Q8IXQ3 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.04■□□□□ 0.32
C9orf40Q8IXQ3 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
C9orf40Q8IXQ3 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.04■□□□□ 0.32
C9orf40Q8IXQ3 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
C9orf40Q8IXQ3 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.04■□□□□ 0.32
C9orf40Q8IXQ3 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
C9orf40Q8IXQ3 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
C9orf40Q8IXQ3 AC073592.3-201ENST00000625118 1834 ntBASIC17.03■□□□□ 0.32
C9orf40Q8IXQ3 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
C9orf40Q8IXQ3 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.03■□□□□ 0.32
C9orf40Q8IXQ3 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
C9orf40Q8IXQ3 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
C9orf40Q8IXQ3 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.03■□□□□ 0.32
C9orf40Q8IXQ3 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
C9orf40Q8IXQ3 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms