Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.17■□□□□ 0.5
TRIM48Q8IWZ4 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.17■□□□□ 0.5
TRIM48Q8IWZ4 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.17■□□□□ 0.5
TRIM48Q8IWZ4 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM48Q8IWZ4 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.17■□□□□ 0.5
TRIM48Q8IWZ4 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.17■□□□□ 0.5
TRIM48Q8IWZ4 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.17■□□□□ 0.5
TRIM48Q8IWZ4 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM48Q8IWZ4 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM48Q8IWZ4 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM48Q8IWZ4 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
TRIM48Q8IWZ4 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
TRIM48Q8IWZ4 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM48Q8IWZ4 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.17■□□□□ 0.5
TRIM48Q8IWZ4 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM48Q8IWZ4 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM48Q8IWZ4 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM48Q8IWZ4 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
TRIM48Q8IWZ4 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM48Q8IWZ4 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM48Q8IWZ4 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.16■□□□□ 0.5
TRIM48Q8IWZ4 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM48Q8IWZ4 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.16■□□□□ 0.5
TRIM48Q8IWZ4 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.16■□□□□ 0.5
TRIM48Q8IWZ4 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.16■□□□□ 0.5
TRIM48Q8IWZ4 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
TRIM48Q8IWZ4 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM48Q8IWZ4 MIR564-202ENST00000385049 94 ntBASIC18.16■□□□□ 0.5
TRIM48Q8IWZ4 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM48Q8IWZ4 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.16■□□□□ 0.5
TRIM48Q8IWZ4 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM48Q8IWZ4 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM48Q8IWZ4 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.16■□□□□ 0.5
TRIM48Q8IWZ4 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.16■□□□□ 0.5
TRIM48Q8IWZ4 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.16■□□□□ 0.5
TRIM48Q8IWZ4 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.16■□□□□ 0.5
TRIM48Q8IWZ4 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM48Q8IWZ4 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM48Q8IWZ4 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM48Q8IWZ4 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
TRIM48Q8IWZ4 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM48Q8IWZ4 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM48Q8IWZ4 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM48Q8IWZ4 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
TRIM48Q8IWZ4 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.16■□□□□ 0.5
TRIM48Q8IWZ4 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM48Q8IWZ4 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM48Q8IWZ4 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM48Q8IWZ4 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM48Q8IWZ4 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
TRIM48Q8IWZ4 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
TRIM48Q8IWZ4 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM48Q8IWZ4 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM48Q8IWZ4 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
TRIM48Q8IWZ4 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM48Q8IWZ4 SPDYE15P-201ENST00000424157 909 ntBASIC18.15■□□□□ 0.5
TRIM48Q8IWZ4 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.15■□□□□ 0.5
TRIM48Q8IWZ4 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.15■□□□□ 0.5
TRIM48Q8IWZ4 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.15■□□□□ 0.5
TRIM48Q8IWZ4 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.15■□□□□ 0.5
TRIM48Q8IWZ4 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
TRIM48Q8IWZ4 AL121956.5-201ENST00000625261 221 ntBASIC18.15■□□□□ 0.5
TRIM48Q8IWZ4 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.15■□□□□ 0.5
TRIM48Q8IWZ4 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM48Q8IWZ4 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM48Q8IWZ4 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.15■□□□□ 0.5
TRIM48Q8IWZ4 AC034236.2-201ENST00000606662 1610 ntBASIC18.15■□□□□ 0.5
TRIM48Q8IWZ4 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM48Q8IWZ4 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM48Q8IWZ4 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM48Q8IWZ4 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM48Q8IWZ4 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM48Q8IWZ4 KRT8P7-201ENST00000533003 1432 ntBASIC18.15■□□□□ 0.5
TRIM48Q8IWZ4 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.14■□□□□ 0.5
TRIM48Q8IWZ4 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
TRIM48Q8IWZ4 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
TRIM48Q8IWZ4 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
TRIM48Q8IWZ4 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
TRIM48Q8IWZ4 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
TRIM48Q8IWZ4 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
TRIM48Q8IWZ4 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM48Q8IWZ4 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM48Q8IWZ4 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM48Q8IWZ4 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM48Q8IWZ4 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
TRIM48Q8IWZ4 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM48Q8IWZ4 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM48Q8IWZ4 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.14■□□□□ 0.49
TRIM48Q8IWZ4 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.14■□□□□ 0.49
TRIM48Q8IWZ4 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM48Q8IWZ4 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.14■□□□□ 0.49
TRIM48Q8IWZ4 RASA4DP-201ENST00000460726 1199 ntBASIC18.14■□□□□ 0.49
TRIM48Q8IWZ4 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.14■□□□□ 0.49
TRIM48Q8IWZ4 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.14■□□□□ 0.49
TRIM48Q8IWZ4 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.14■□□□□ 0.49
TRIM48Q8IWZ4 AC091076.1-201ENST00000610741 619 ntBASIC18.14■□□□□ 0.49
TRIM48Q8IWZ4 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.14■□□□□ 0.49
TRIM48Q8IWZ4 AC068587.9-201ENST00000641814 219 ntBASIC18.14■□□□□ 0.49
TRIM48Q8IWZ4 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.14■□□□□ 0.49
TRIM48Q8IWZ4 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms