Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
CCDC83Q8IWF9 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC83Q8IWF9 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC83Q8IWF9 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC83Q8IWF9 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC21.77■■□□□ 1.08
CCDC83Q8IWF9 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC83Q8IWF9 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC83Q8IWF9 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC21.77■■□□□ 1.08
CCDC83Q8IWF9 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC21.77■■□□□ 1.08
CCDC83Q8IWF9 MIR4674-201ENST00000582457 87 ntBASIC21.77■■□□□ 1.08
CCDC83Q8IWF9 DECR2-212ENST00000627716 352 ntTSL 2 BASIC21.77■■□□□ 1.08
CCDC83Q8IWF9 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CCDC83Q8IWF9 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC83Q8IWF9 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC83Q8IWF9 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC83Q8IWF9 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.07
CCDC83Q8IWF9 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.07
CCDC83Q8IWF9 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC83Q8IWF9 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC83Q8IWF9 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC21.76■■□□□ 1.07
CCDC83Q8IWF9 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC83Q8IWF9 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC21.76■■□□□ 1.07
CCDC83Q8IWF9 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC83Q8IWF9 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC83Q8IWF9 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC83Q8IWF9 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC21.76■■□□□ 1.07
CCDC83Q8IWF9 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC83Q8IWF9 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC21.76■■□□□ 1.07
CCDC83Q8IWF9 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CCDC83Q8IWF9 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC21.76■■□□□ 1.07
CCDC83Q8IWF9 KRT18P41-201ENST00000518924 1277 ntBASIC21.76■■□□□ 1.07
CCDC83Q8IWF9 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC83Q8IWF9 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC21.76■■□□□ 1.07
CCDC83Q8IWF9 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC21.76■■□□□ 1.07
CCDC83Q8IWF9 CFL2-205ENST00000555765 632 ntTSL 2 BASIC21.76■■□□□ 1.07
CCDC83Q8IWF9 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC21.76■■□□□ 1.07
CCDC83Q8IWF9 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC83Q8IWF9 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC21.76■■□□□ 1.07
CCDC83Q8IWF9 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
CCDC83Q8IWF9 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC83Q8IWF9 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC83Q8IWF9 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC21.76■■□□□ 1.07
CCDC83Q8IWF9 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC83Q8IWF9 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC21.76■■□□□ 1.07
CCDC83Q8IWF9 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC21.76■■□□□ 1.07
CCDC83Q8IWF9 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CCDC83Q8IWF9 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC21.75■■□□□ 1.07
CCDC83Q8IWF9 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC21.75■■□□□ 1.07
CCDC83Q8IWF9 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC83Q8IWF9 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC21.75■■□□□ 1.07
CCDC83Q8IWF9 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC83Q8IWF9 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC83Q8IWF9 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CCDC83Q8IWF9 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC83Q8IWF9 MDFI-202ENST00000373050 809 ntTSL 2 BASIC21.75■■□□□ 1.07
CCDC83Q8IWF9 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC83Q8IWF9 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC83Q8IWF9 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC21.75■■□□□ 1.07
CCDC83Q8IWF9 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC83Q8IWF9 AL355355.2-201ENST00000442321 338 ntBASIC21.75■■□□□ 1.07
CCDC83Q8IWF9 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CCDC83Q8IWF9 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC83Q8IWF9 CYGB-204ENST00000589342 815 ntTSL 3 BASIC21.75■■□□□ 1.07
CCDC83Q8IWF9 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC21.75■■□□□ 1.07
CCDC83Q8IWF9 AC026471.5-201ENST00000615068 467 ntBASIC21.75■■□□□ 1.07
CCDC83Q8IWF9 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC83Q8IWF9 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC83Q8IWF9 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC83Q8IWF9 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC83Q8IWF9 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC83Q8IWF9 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC83Q8IWF9 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC21.75■■□□□ 1.07
CCDC83Q8IWF9 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC21.75■■□□□ 1.07
CCDC83Q8IWF9 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC83Q8IWF9 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC21.75■■□□□ 1.07
CCDC83Q8IWF9 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC21.74■■□□□ 1.07
CCDC83Q8IWF9 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC83Q8IWF9 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC83Q8IWF9 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC21.74■■□□□ 1.07
CCDC83Q8IWF9 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC21.74■■□□□ 1.07
CCDC83Q8IWF9 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC83Q8IWF9 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC21.74■■□□□ 1.07
CCDC83Q8IWF9 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
CCDC83Q8IWF9 ELP6-205ENST00000439305 880 ntTSL 2 BASIC21.74■■□□□ 1.07
CCDC83Q8IWF9 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC21.74■■□□□ 1.07
CCDC83Q8IWF9 USP36-216ENST00000589424 970 ntTSL 5 BASIC21.74■■□□□ 1.07
CCDC83Q8IWF9 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC21.74■■□□□ 1.07
CCDC83Q8IWF9 AP001412.1-201ENST00000608405 714 ntBASIC21.74■■□□□ 1.07
CCDC83Q8IWF9 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC21.74■■□□□ 1.07
CCDC83Q8IWF9 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC21.74■■□□□ 1.07
CCDC83Q8IWF9 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC83Q8IWF9 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC83Q8IWF9 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC83Q8IWF9 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC83Q8IWF9 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC83Q8IWF9 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
CCDC83Q8IWF9 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC83Q8IWF9 FLYWCH1P1-201ENST00000460917 1874 ntBASIC21.73■■□□□ 1.07
CCDC83Q8IWF9 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC21.73■■□□□ 1.07
CCDC83Q8IWF9 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms