Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VRK2Q86Y07 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.14■□□□□ 0.33
VRK2Q86Y07 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.14■□□□□ 0.33
VRK2Q86Y07 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VRK2Q86Y07 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VRK2Q86Y07 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
VRK2Q86Y07 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VRK2Q86Y07 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VRK2Q86Y07 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VRK2Q86Y07 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VRK2Q86Y07 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VRK2Q86Y07 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
VRK2Q86Y07 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VRK2Q86Y07 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.13■□□□□ 0.33
VRK2Q86Y07 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
VRK2Q86Y07 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VRK2Q86Y07 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
VRK2Q86Y07 AC005332.8-201ENST00000622750 2735 ntBASIC17.13■□□□□ 0.33
VRK2Q86Y07 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VRK2Q86Y07 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.13■□□□□ 0.33
VRK2Q86Y07 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.13■□□□□ 0.33
VRK2Q86Y07 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VRK2Q86Y07 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.13■□□□□ 0.33
VRK2Q86Y07 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VRK2Q86Y07 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VRK2Q86Y07 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VRK2Q86Y07 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
VRK2Q86Y07 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.13■□□□□ 0.33
VRK2Q86Y07 TSPY7P-201ENST00000431358 1114 ntBASIC17.13■□□□□ 0.33
VRK2Q86Y07 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.13■□□□□ 0.33
VRK2Q86Y07 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.13■□□□□ 0.33
VRK2Q86Y07 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
VRK2Q86Y07 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.13■□□□□ 0.33
VRK2Q86Y07 CA15P1-201ENST00000481698 905 ntBASIC17.13■□□□□ 0.33
VRK2Q86Y07 KRT18P41-201ENST00000518924 1277 ntBASIC17.13■□□□□ 0.33
VRK2Q86Y07 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VRK2Q86Y07 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.13■□□□□ 0.33
VRK2Q86Y07 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.13■□□□□ 0.33
VRK2Q86Y07 MIR4674-201ENST00000582457 87 ntBASIC17.13■□□□□ 0.33
VRK2Q86Y07 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.13■□□□□ 0.33
VRK2Q86Y07 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VRK2Q86Y07 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.13■□□□□ 0.33
VRK2Q86Y07 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VRK2Q86Y07 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VRK2Q86Y07 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
VRK2Q86Y07 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.12■□□□□ 0.33
VRK2Q86Y07 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
VRK2Q86Y07 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
VRK2Q86Y07 AC099343.3-201ENST00000605834 2503 ntBASIC17.12■□□□□ 0.33
VRK2Q86Y07 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
VRK2Q86Y07 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VRK2Q86Y07 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VRK2Q86Y07 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.12■□□□□ 0.33
VRK2Q86Y07 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
VRK2Q86Y07 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.12■□□□□ 0.33
VRK2Q86Y07 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VRK2Q86Y07 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.12■□□□□ 0.33
VRK2Q86Y07 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.12■□□□□ 0.33
VRK2Q86Y07 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.12■□□□□ 0.33
VRK2Q86Y07 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.12■□□□□ 0.33
VRK2Q86Y07 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.12■□□□□ 0.33
VRK2Q86Y07 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.12■□□□□ 0.33
VRK2Q86Y07 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
VRK2Q86Y07 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.12■□□□□ 0.33
VRK2Q86Y07 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.12■□□□□ 0.33
VRK2Q86Y07 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
VRK2Q86Y07 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VRK2Q86Y07 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.12■□□□□ 0.33
VRK2Q86Y07 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
VRK2Q86Y07 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
VRK2Q86Y07 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.12■□□□□ 0.33
VRK2Q86Y07 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VRK2Q86Y07 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.12■□□□□ 0.33
VRK2Q86Y07 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
VRK2Q86Y07 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
VRK2Q86Y07 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
VRK2Q86Y07 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
VRK2Q86Y07 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VRK2Q86Y07 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VRK2Q86Y07 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VRK2Q86Y07 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VRK2Q86Y07 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VRK2Q86Y07 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
VRK2Q86Y07 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
VRK2Q86Y07 ESPNP-201ENST00000270691 2015 ntBASIC17.11■□□□□ 0.33
VRK2Q86Y07 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VRK2Q86Y07 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
VRK2Q86Y07 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.11■□□□□ 0.33
VRK2Q86Y07 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.11■□□□□ 0.33
VRK2Q86Y07 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VRK2Q86Y07 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
VRK2Q86Y07 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.11■□□□□ 0.33
VRK2Q86Y07 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
VRK2Q86Y07 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VRK2Q86Y07 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VRK2Q86Y07 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VRK2Q86Y07 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
VRK2Q86Y07 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.11■□□□□ 0.33
VRK2Q86Y07 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VRK2Q86Y07 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms