Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 PP7080-204ENST00000510714 601 ntTSL 3 BASIC20.63■□□□□ 0.89
TRIM50Q86XT4 MPI-205ENST00000562606 1052 ntTSL 3 BASIC20.63■□□□□ 0.89
TRIM50Q86XT4 MIR3180-4-201ENST00000582223 153 ntBASIC20.63■□□□□ 0.89
TRIM50Q86XT4 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC20.63■□□□□ 0.89
TRIM50Q86XT4 WDR88-203ENST00000592765 651 ntTSL 5 BASIC20.63■□□□□ 0.89
TRIM50Q86XT4 AL390719.2-201ENST00000606993 987 ntBASIC20.63■□□□□ 0.89
TRIM50Q86XT4 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC20.63■□□□□ 0.89
TRIM50Q86XT4 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM50Q86XT4 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.63■□□□□ 0.89
TRIM50Q86XT4 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
TRIM50Q86XT4 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
TRIM50Q86XT4 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM50Q86XT4 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM50Q86XT4 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.63■□□□□ 0.89
TRIM50Q86XT4 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM50Q86XT4 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM50Q86XT4 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM50Q86XT4 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.62■□□□□ 0.89
TRIM50Q86XT4 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM50Q86XT4 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM50Q86XT4 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM50Q86XT4 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM50Q86XT4 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM50Q86XT4 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.62■□□□□ 0.89
TRIM50Q86XT4 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC20.62■□□□□ 0.89
TRIM50Q86XT4 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC20.62■□□□□ 0.89
TRIM50Q86XT4 TPSP2-201ENST00000561760 610 ntBASIC20.62■□□□□ 0.89
TRIM50Q86XT4 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC20.62■□□□□ 0.89
TRIM50Q86XT4 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.62■□□□□ 0.89
TRIM50Q86XT4 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM50Q86XT4 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.62■□□□□ 0.89
TRIM50Q86XT4 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
TRIM50Q86XT4 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
TRIM50Q86XT4 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM50Q86XT4 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM50Q86XT4 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.61■□□□□ 0.89
TRIM50Q86XT4 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
TRIM50Q86XT4 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC20.61■□□□□ 0.89
TRIM50Q86XT4 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM50Q86XT4 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC20.61■□□□□ 0.89
TRIM50Q86XT4 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
TRIM50Q86XT4 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC20.61■□□□□ 0.89
TRIM50Q86XT4 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC20.61■□□□□ 0.89
TRIM50Q86XT4 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20.61■□□□□ 0.89
TRIM50Q86XT4 IL11-204ENST00000590625 1028 ntTSL 2 BASIC20.61■□□□□ 0.89
TRIM50Q86XT4 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC20.61■□□□□ 0.89
TRIM50Q86XT4 AC083906.6-201ENST00000641366 219 ntBASIC20.61■□□□□ 0.89
TRIM50Q86XT4 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM50Q86XT4 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM50Q86XT4 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM50Q86XT4 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.61■□□□□ 0.89
TRIM50Q86XT4 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM50Q86XT4 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
TRIM50Q86XT4 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM50Q86XT4 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
TRIM50Q86XT4 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM50Q86XT4 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM50Q86XT4 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
TRIM50Q86XT4 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.6■□□□□ 0.89
TRIM50Q86XT4 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM50Q86XT4 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM50Q86XT4 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM50Q86XT4 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM50Q86XT4 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC20.6■□□□□ 0.89
TRIM50Q86XT4 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM50Q86XT4 LINC00265-3P-201ENST00000447588 903 ntBASIC20.6■□□□□ 0.89
TRIM50Q86XT4 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM50Q86XT4 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.6■□□□□ 0.89
TRIM50Q86XT4 CIB2-208ENST00000560618 804 ntTSL 2 BASIC20.6■□□□□ 0.89
TRIM50Q86XT4 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC20.6■□□□□ 0.89
TRIM50Q86XT4 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM50Q86XT4 VPS72-207ENST00000640458 689 ntTSL 5 BASIC20.6■□□□□ 0.89
TRIM50Q86XT4 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM50Q86XT4 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM50Q86XT4 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.6■□□□□ 0.89
TRIM50Q86XT4 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM50Q86XT4 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM50Q86XT4 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM50Q86XT4 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM50Q86XT4 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
TRIM50Q86XT4 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.59■□□□□ 0.89
TRIM50Q86XT4 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.59■□□□□ 0.89
TRIM50Q86XT4 BAALC-202ENST00000306391 243 ntTSL 5 BASIC20.59■□□□□ 0.89
TRIM50Q86XT4 BAALC-204ENST00000330955 222 ntTSL 5 BASIC20.59■□□□□ 0.89
TRIM50Q86XT4 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM50Q86XT4 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
TRIM50Q86XT4 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC20.59■□□□□ 0.89
TRIM50Q86XT4 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM50Q86XT4 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.59■□□□□ 0.89
TRIM50Q86XT4 SDHD-206ENST00000528182 754 ntTSL 3 BASIC20.59■□□□□ 0.89
TRIM50Q86XT4 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.59■□□□□ 0.89
TRIM50Q86XT4 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC20.59■□□□□ 0.89
TRIM50Q86XT4 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM50Q86XT4 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC20.59■□□□□ 0.89
TRIM50Q86XT4 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
TRIM50Q86XT4 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM50Q86XT4 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM50Q86XT4 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM50Q86XT4 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM50Q86XT4 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms