Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRTM1Q86UE6 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC16.09■□□□□ 0.17
LRRTM1Q86UE6 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC16.09■□□□□ 0.17
LRRTM1Q86UE6 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC16.09■□□□□ 0.17
LRRTM1Q86UE6 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRTM1Q86UE6 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.09■□□□□ 0.17
LRRTM1Q86UE6 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRTM1Q86UE6 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRTM1Q86UE6 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.09■□□□□ 0.17
LRRTM1Q86UE6 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRTM1Q86UE6 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRTM1Q86UE6 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
LRRTM1Q86UE6 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.09■□□□□ 0.17
LRRTM1Q86UE6 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
LRRTM1Q86UE6 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.09■□□□□ 0.17
LRRTM1Q86UE6 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
LRRTM1Q86UE6 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRTM1Q86UE6 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRTM1Q86UE6 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LRRTM1Q86UE6 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
LRRTM1Q86UE6 PRORSD1P-202ENST00000563365 2154 ntBASIC16.09■□□□□ 0.17
LRRTM1Q86UE6 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.17
LRRTM1Q86UE6 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LRRTM1Q86UE6 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
LRRTM1Q86UE6 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.08■□□□□ 0.17
LRRTM1Q86UE6 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.08■□□□□ 0.17
LRRTM1Q86UE6 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
LRRTM1Q86UE6 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRTM1Q86UE6 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRTM1Q86UE6 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.08■□□□□ 0.16
LRRTM1Q86UE6 MAP2K4P1-201ENST00000438453 1195 ntBASIC16.08■□□□□ 0.16
LRRTM1Q86UE6 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
LRRTM1Q86UE6 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LRRTM1Q86UE6 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.08■□□□□ 0.16
LRRTM1Q86UE6 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC16.08■□□□□ 0.16
LRRTM1Q86UE6 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.08■□□□□ 0.16
LRRTM1Q86UE6 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC16.08■□□□□ 0.16
LRRTM1Q86UE6 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC16.08■□□□□ 0.16
LRRTM1Q86UE6 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC16.08■□□□□ 0.16
LRRTM1Q86UE6 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
LRRTM1Q86UE6 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LRRTM1Q86UE6 HTR7P1-201ENST00000538670 1336 ntBASIC16.08■□□□□ 0.16
LRRTM1Q86UE6 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRTM1Q86UE6 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRTM1Q86UE6 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.08■□□□□ 0.16
LRRTM1Q86UE6 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.08■□□□□ 0.16
LRRTM1Q86UE6 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRTM1Q86UE6 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.08■□□□□ 0.16
LRRTM1Q86UE6 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
LRRTM1Q86UE6 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.08■□□□□ 0.16
LRRTM1Q86UE6 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
LRRTM1Q86UE6 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRTM1Q86UE6 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRTM1Q86UE6 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
LRRTM1Q86UE6 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LRRTM1Q86UE6 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRTM1Q86UE6 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.07■□□□□ 0.16
LRRTM1Q86UE6 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.07■□□□□ 0.16
LRRTM1Q86UE6 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRTM1Q86UE6 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRTM1Q86UE6 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LRRTM1Q86UE6 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
LRRTM1Q86UE6 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRTM1Q86UE6 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRTM1Q86UE6 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.07■□□□□ 0.16
LRRTM1Q86UE6 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
LRRTM1Q86UE6 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRTM1Q86UE6 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
LRRTM1Q86UE6 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LRRTM1Q86UE6 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.07■□□□□ 0.16
LRRTM1Q86UE6 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC16.07■□□□□ 0.16
LRRTM1Q86UE6 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC16.07■□□□□ 0.16
LRRTM1Q86UE6 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.07■□□□□ 0.16
LRRTM1Q86UE6 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LRRTM1Q86UE6 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC16.07■□□□□ 0.16
LRRTM1Q86UE6 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC16.07■□□□□ 0.16
LRRTM1Q86UE6 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC16.07■□□□□ 0.16
LRRTM1Q86UE6 GAMT-205ENST00000640762 751 ntTSL 5 BASIC16.07■□□□□ 0.16
LRRTM1Q86UE6 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LRRTM1Q86UE6 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRTM1Q86UE6 RCC2P3-201ENST00000418112 1537 ntBASIC16.07■□□□□ 0.16
LRRTM1Q86UE6 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.07■□□□□ 0.16
LRRTM1Q86UE6 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
LRRTM1Q86UE6 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRTM1Q86UE6 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRTM1Q86UE6 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRTM1Q86UE6 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRTM1Q86UE6 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.07■□□□□ 0.16
LRRTM1Q86UE6 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.07■□□□□ 0.16
LRRTM1Q86UE6 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
LRRTM1Q86UE6 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRTM1Q86UE6 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LRRTM1Q86UE6 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
LRRTM1Q86UE6 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
LRRTM1Q86UE6 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.07■□□□□ 0.16
LRRTM1Q86UE6 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LRRTM1Q86UE6 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.07■□□□□ 0.16
LRRTM1Q86UE6 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRTM1Q86UE6 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRRTM1Q86UE6 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms