Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF550Q7Z398 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF550Q7Z398 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF550Q7Z398 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.07■□□□□ 0.32
ZNF550Q7Z398 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.07■□□□□ 0.32
ZNF550Q7Z398 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF550Q7Z398 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF550Q7Z398 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF550Q7Z398 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.07■□□□□ 0.32
ZNF550Q7Z398 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF550Q7Z398 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.07■□□□□ 0.32
ZNF550Q7Z398 AC135050.7-201ENST00000624508 2218 ntBASIC17.06■□□□□ 0.32
ZNF550Q7Z398 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF550Q7Z398 AL499627.1-201ENST00000569373 2188 ntBASIC17.06■□□□□ 0.32
ZNF550Q7Z398 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF550Q7Z398 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
ZNF550Q7Z398 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.06■□□□□ 0.32
ZNF550Q7Z398 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
ZNF550Q7Z398 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
ZNF550Q7Z398 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
ZNF550Q7Z398 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF550Q7Z398 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF550Q7Z398 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF550Q7Z398 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
ZNF550Q7Z398 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.06■□□□□ 0.32
ZNF550Q7Z398 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF550Q7Z398 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.06■□□□□ 0.32
ZNF550Q7Z398 AP000593.1-201ENST00000393668 712 ntBASIC17.06■□□□□ 0.32
ZNF550Q7Z398 TMPOP1-202ENST00000424642 1267 ntBASIC17.06■□□□□ 0.32
ZNF550Q7Z398 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.06■□□□□ 0.32
ZNF550Q7Z398 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.06■□□□□ 0.32
ZNF550Q7Z398 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.06■□□□□ 0.32
ZNF550Q7Z398 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF550Q7Z398 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF550Q7Z398 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF550Q7Z398 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF550Q7Z398 GPAT2P1-201ENST00000444924 1672 ntBASIC17.06■□□□□ 0.32
ZNF550Q7Z398 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF550Q7Z398 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF550Q7Z398 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF550Q7Z398 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
ZNF550Q7Z398 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.06■□□□□ 0.32
ZNF550Q7Z398 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
ZNF550Q7Z398 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF550Q7Z398 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
ZNF550Q7Z398 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF550Q7Z398 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.06■□□□□ 0.32
ZNF550Q7Z398 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.06■□□□□ 0.32
ZNF550Q7Z398 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF550Q7Z398 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF550Q7Z398 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
ZNF550Q7Z398 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF550Q7Z398 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF550Q7Z398 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF550Q7Z398 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF550Q7Z398 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.05■□□□□ 0.32
ZNF550Q7Z398 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF550Q7Z398 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF550Q7Z398 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF550Q7Z398 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.05■□□□□ 0.32
ZNF550Q7Z398 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.05■□□□□ 0.32
ZNF550Q7Z398 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.05■□□□□ 0.32
ZNF550Q7Z398 AC005363.2-201ENST00000618631 242 ntBASIC17.05■□□□□ 0.32
ZNF550Q7Z398 AC010947.1-201ENST00000623454 693 ntBASIC17.05■□□□□ 0.32
ZNF550Q7Z398 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.05■□□□□ 0.32
ZNF550Q7Z398 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF550Q7Z398 BICD1-207ENST00000551848 1962 ntBASIC17.05■□□□□ 0.32
ZNF550Q7Z398 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF550Q7Z398 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF550Q7Z398 MYLKP1-201ENST00000509077 1580 ntBASIC17.05■□□□□ 0.32
ZNF550Q7Z398 AL162741.1-201ENST00000565563 1558 ntBASIC17.05■□□□□ 0.32
ZNF550Q7Z398 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF550Q7Z398 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.05■□□□□ 0.32
ZNF550Q7Z398 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.05■□□□□ 0.32
ZNF550Q7Z398 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.05■□□□□ 0.32
ZNF550Q7Z398 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.04■□□□□ 0.32
ZNF550Q7Z398 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.04■□□□□ 0.32
ZNF550Q7Z398 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF550Q7Z398 AC034236.2-201ENST00000606662 1610 ntBASIC17.04■□□□□ 0.32
ZNF550Q7Z398 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
ZNF550Q7Z398 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF550Q7Z398 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
ZNF550Q7Z398 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF550Q7Z398 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.04■□□□□ 0.32
ZNF550Q7Z398 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF550Q7Z398 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.04■□□□□ 0.32
ZNF550Q7Z398 SLC25A1P2-201ENST00000430693 912 ntBASIC17.04■□□□□ 0.32
ZNF550Q7Z398 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.04■□□□□ 0.32
ZNF550Q7Z398 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF550Q7Z398 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF550Q7Z398 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
ZNF550Q7Z398 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF550Q7Z398 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF550Q7Z398 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF550Q7Z398 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF550Q7Z398 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF550Q7Z398 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF550Q7Z398 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF550Q7Z398 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.04■□□□□ 0.32
ZNF550Q7Z398 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms