Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.1■□□□□ 0.33
TUBA1AQ71U36 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TUBA1AQ71U36 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TUBA1AQ71U36 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
TUBA1AQ71U36 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TUBA1AQ71U36 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBA1AQ71U36 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBA1AQ71U36 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBA1AQ71U36 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TUBA1AQ71U36 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBA1AQ71U36 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TUBA1AQ71U36 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBA1AQ71U36 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
TUBA1AQ71U36 TNRC18P3-201ENST00000441896 2691 ntBASIC17.09■□□□□ 0.33
TUBA1AQ71U36 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBA1AQ71U36 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBA1AQ71U36 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBA1AQ71U36 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TUBA1AQ71U36 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.09■□□□□ 0.33
TUBA1AQ71U36 TUBB8P6-201ENST00000436895 1288 ntBASIC17.09■□□□□ 0.33
TUBA1AQ71U36 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.09■□□□□ 0.33
TUBA1AQ71U36 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.09■□□□□ 0.33
TUBA1AQ71U36 KRT18P16-201ENST00000510337 1294 ntBASIC17.09■□□□□ 0.33
TUBA1AQ71U36 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.09■□□□□ 0.33
TUBA1AQ71U36 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.09■□□□□ 0.33
TUBA1AQ71U36 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.09■□□□□ 0.33
TUBA1AQ71U36 Z99916.2-201ENST00000604037 246 ntBASIC17.09■□□□□ 0.33
TUBA1AQ71U36 AP006294.2-201ENST00000641667 209 ntBASIC17.09■□□□□ 0.33
TUBA1AQ71U36 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TUBA1AQ71U36 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.09■□□□□ 0.33
TUBA1AQ71U36 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBA1AQ71U36 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBA1AQ71U36 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TUBA1AQ71U36 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TUBA1AQ71U36 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBA1AQ71U36 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBA1AQ71U36 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBA1AQ71U36 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBA1AQ71U36 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TUBA1AQ71U36 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBA1AQ71U36 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBA1AQ71U36 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBA1AQ71U36 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.09■□□□□ 0.33
TUBA1AQ71U36 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBA1AQ71U36 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBA1AQ71U36 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.09■□□□□ 0.33
TUBA1AQ71U36 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TUBA1AQ71U36 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.09■□□□□ 0.33
TUBA1AQ71U36 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBA1AQ71U36 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TUBA1AQ71U36 AL391005.1-201ENST00000623953 2435 ntBASIC17.09■□□□□ 0.33
TUBA1AQ71U36 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBA1AQ71U36 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBA1AQ71U36 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
TUBA1AQ71U36 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
TUBA1AQ71U36 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
TUBA1AQ71U36 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TUBA1AQ71U36 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.33
TUBA1AQ71U36 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
TUBA1AQ71U36 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.08■□□□□ 0.33
TUBA1AQ71U36 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TUBA1AQ71U36 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TUBA1AQ71U36 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TUBA1AQ71U36 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.08■□□□□ 0.33
TUBA1AQ71U36 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TUBA1AQ71U36 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
TUBA1AQ71U36 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
TUBA1AQ71U36 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.08■□□□□ 0.32
TUBA1AQ71U36 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.08■□□□□ 0.32
TUBA1AQ71U36 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
TUBA1AQ71U36 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.08■□□□□ 0.32
TUBA1AQ71U36 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TUBA1AQ71U36 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TUBA1AQ71U36 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TUBA1AQ71U36 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
TUBA1AQ71U36 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
TUBA1AQ71U36 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.08■□□□□ 0.32
TUBA1AQ71U36 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TUBA1AQ71U36 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TUBA1AQ71U36 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
TUBA1AQ71U36 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.08■□□□□ 0.32
TUBA1AQ71U36 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.08■□□□□ 0.32
TUBA1AQ71U36 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TUBA1AQ71U36 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.08■□□□□ 0.32
TUBA1AQ71U36 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
TUBA1AQ71U36 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
TUBA1AQ71U36 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TUBA1AQ71U36 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TUBA1AQ71U36 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
TUBA1AQ71U36 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TUBA1AQ71U36 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TUBA1AQ71U36 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.08■□□□□ 0.32
TUBA1AQ71U36 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TUBA1AQ71U36 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TUBA1AQ71U36 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.07■□□□□ 0.32
TUBA1AQ71U36 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
TUBA1AQ71U36 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TUBA1AQ71U36 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TUBA1AQ71U36 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TUBA1AQ71U36 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms