Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
KRT40Q6A162 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
KRT40Q6A162 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC21.44■■□□□ 1.02
KRT40Q6A162 TOLLIP-AS1-201ENST00000530897 939 ntBASIC21.44■■□□□ 1.02
KRT40Q6A162 CR769767.2-201ENST00000622735 460 ntBASIC21.44■■□□□ 1.02
KRT40Q6A162 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
KRT40Q6A162 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
KRT40Q6A162 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
KRT40Q6A162 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
KRT40Q6A162 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
KRT40Q6A162 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
KRT40Q6A162 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC21.44■■□□□ 1.02
KRT40Q6A162 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
KRT40Q6A162 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
KRT40Q6A162 AC034236.2-201ENST00000606662 1610 ntBASIC21.44■■□□□ 1.02
KRT40Q6A162 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
KRT40Q6A162 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC21.44■■□□□ 1.02
KRT40Q6A162 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
KRT40Q6A162 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
KRT40Q6A162 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC21.43■■□□□ 1.02
KRT40Q6A162 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
KRT40Q6A162 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
KRT40Q6A162 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
KRT40Q6A162 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
KRT40Q6A162 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC21.43■■□□□ 1.02
KRT40Q6A162 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
KRT40Q6A162 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
KRT40Q6A162 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC21.43■■□□□ 1.02
KRT40Q6A162 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
KRT40Q6A162 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC21.43■■□□□ 1.02
KRT40Q6A162 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC21.43■■□□□ 1.02
KRT40Q6A162 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC21.43■■□□□ 1.02
KRT40Q6A162 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC21.43■■□□□ 1.02
KRT40Q6A162 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC21.43■■□□□ 1.02
KRT40Q6A162 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
KRT40Q6A162 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
KRT40Q6A162 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
KRT40Q6A162 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
KRT40Q6A162 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
KRT40Q6A162 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
KRT40Q6A162 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC21.42■■□□□ 1.02
KRT40Q6A162 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
KRT40Q6A162 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
KRT40Q6A162 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
KRT40Q6A162 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
KRT40Q6A162 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
KRT40Q6A162 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
KRT40Q6A162 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
KRT40Q6A162 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
KRT40Q6A162 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC21.42■■□□□ 1.02
KRT40Q6A162 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
KRT40Q6A162 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
KRT40Q6A162 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC21.42■■□□□ 1.02
KRT40Q6A162 EGLN1P1-201ENST00000531623 762 ntBASIC21.42■■□□□ 1.02
KRT40Q6A162 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
KRT40Q6A162 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
KRT40Q6A162 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
KRT40Q6A162 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
KRT40Q6A162 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
KRT40Q6A162 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
KRT40Q6A162 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
KRT40Q6A162 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
KRT40Q6A162 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
KRT40Q6A162 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC21.41■■□□□ 1.02
KRT40Q6A162 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC21.41■■□□□ 1.02
KRT40Q6A162 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC21.41■■□□□ 1.02
KRT40Q6A162 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
KRT40Q6A162 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
KRT40Q6A162 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
KRT40Q6A162 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
KRT40Q6A162 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC21.41■■□□□ 1.02
KRT40Q6A162 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC21.41■■□□□ 1.02
KRT40Q6A162 KRT8P50-201ENST00000562022 1438 ntBASIC21.41■■□□□ 1.02
KRT40Q6A162 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC21.41■■□□□ 1.02
KRT40Q6A162 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC21.41■■□□□ 1.02
KRT40Q6A162 AC007613.1-201ENST00000572811 2597 ntBASIC21.41■■□□□ 1.02
KRT40Q6A162 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
KRT40Q6A162 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
KRT40Q6A162 LIN28AP1-201ENST00000429574 405 ntBASIC21.41■■□□□ 1.02
KRT40Q6A162 ATP5G1P1-201ENST00000448724 379 ntBASIC21.41■■□□□ 1.02
KRT40Q6A162 ECEL1P2-202ENST00000465689 757 ntBASIC21.41■■□□□ 1.02
KRT40Q6A162 KRT18P56-201ENST00000507275 550 ntBASIC21.41■■□□□ 1.02
KRT40Q6A162 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
KRT40Q6A162 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
KRT40Q6A162 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC21.41■■□□□ 1.02
KRT40Q6A162 CLN6-221ENST00000637494 765 ntTSL 5 BASIC21.41■■□□□ 1.02
KRT40Q6A162 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
KRT40Q6A162 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
KRT40Q6A162 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
KRT40Q6A162 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC21.41■■□□□ 1.02
KRT40Q6A162 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
KRT40Q6A162 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
KRT40Q6A162 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC21.4■■□□□ 1.02
KRT40Q6A162 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
KRT40Q6A162 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
KRT40Q6A162 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
KRT40Q6A162 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC21.4■■□□□ 1.02
KRT40Q6A162 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
KRT40Q6A162 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
KRT40Q6A162 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms