Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC10.08□□□□□ -0.8
UBR4Q5T4S7 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC10.08□□□□□ -0.8
UBR4Q5T4S7 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
UBR4Q5T4S7 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC10.08□□□□□ -0.8
UBR4Q5T4S7 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
UBR4Q5T4S7 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC10.08□□□□□ -0.8
UBR4Q5T4S7 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
UBR4Q5T4S7 LAGE3P1-201ENST00000425356 484 ntBASIC10.08□□□□□ -0.8
UBR4Q5T4S7 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC10.08□□□□□ -0.8
UBR4Q5T4S7 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
UBR4Q5T4S7 AC092552.1-201ENST00000547243 906 ntBASIC10.08□□□□□ -0.8
UBR4Q5T4S7 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC10.08□□□□□ -0.8
UBR4Q5T4S7 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC10.08□□□□□ -0.8
UBR4Q5T4S7 MIR4722-201ENST00000578292 60 ntBASIC10.08□□□□□ -0.8
UBR4Q5T4S7 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
UBR4Q5T4S7 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC10.08□□□□□ -0.8
UBR4Q5T4S7 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
UBR4Q5T4S7 PIN1P1-201ENST00000412108 996 ntBASIC10.07□□□□□ -0.8
UBR4Q5T4S7 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC10.07□□□□□ -0.8
UBR4Q5T4S7 HCG4B-203ENST00000450128 991 ntBASIC10.07□□□□□ -0.8
UBR4Q5T4S7 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
UBR4Q5T4S7 CD74-212ENST00000524315 584 ntTSL 5 BASIC10.07□□□□□ -0.8
UBR4Q5T4S7 MBP-227ENST00000526111 581 ntTSL 4 BASIC10.07□□□□□ -0.8
UBR4Q5T4S7 NKAPP1-205ENST00000585790 367 ntBASIC10.07□□□□□ -0.8
UBR4Q5T4S7 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
UBR4Q5T4S7 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
UBR4Q5T4S7 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
UBR4Q5T4S7 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC10.07□□□□□ -0.8
UBR4Q5T4S7 MTDHP4-201ENST00000600287 670 ntBASIC10.07□□□□□ -0.8
UBR4Q5T4S7 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC10.07□□□□□ -0.8
UBR4Q5T4S7 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
UBR4Q5T4S7 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
UBR4Q5T4S7 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
UBR4Q5T4S7 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
UBR4Q5T4S7 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
UBR4Q5T4S7 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
UBR4Q5T4S7 ENSA-205ENST00000361532 792 ntTSL 2 BASIC10.07□□□□□ -0.8
UBR4Q5T4S7 SLC4A1APP2-201ENST00000424054 1259 ntBASIC10.07□□□□□ -0.8
UBR4Q5T4S7 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC10.07□□□□□ -0.8
UBR4Q5T4S7 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC10.07□□□□□ -0.8
UBR4Q5T4S7 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
UBR4Q5T4S7 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC10.07□□□□□ -0.8
UBR4Q5T4S7 FADS2-212ENST00000522639 360 ntTSL 5 BASIC10.07□□□□□ -0.8
UBR4Q5T4S7 FADS2-215ENST00000574708 385 ntTSL 3 BASIC10.07□□□□□ -0.8
UBR4Q5T4S7 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
UBR4Q5T4S7 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC10.07□□□□□ -0.8
UBR4Q5T4S7 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC10.07□□□□□ -0.8
UBR4Q5T4S7 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC10.07□□□□□ -0.8
UBR4Q5T4S7 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
UBR4Q5T4S7 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
UBR4Q5T4S7 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
UBR4Q5T4S7 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
UBR4Q5T4S7 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC10.06□□□□□ -0.8
UBR4Q5T4S7 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC10.06□□□□□ -0.8
UBR4Q5T4S7 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
UBR4Q5T4S7 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC10.06□□□□□ -0.8
UBR4Q5T4S7 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC10.06□□□□□ -0.8
UBR4Q5T4S7 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC10.06□□□□□ -0.8
UBR4Q5T4S7 FEM1AP1-201ENST00000431297 1995 ntBASIC10.06□□□□□ -0.8
UBR4Q5T4S7 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
UBR4Q5T4S7 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
UBR4Q5T4S7 NABP1-203ENST00000409510 843 ntTSL 5 BASIC10.06□□□□□ -0.8
UBR4Q5T4S7 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC10.06□□□□□ -0.8
UBR4Q5T4S7 AC115618.3-201ENST00000623114 425 ntBASIC10.06□□□□□ -0.8
UBR4Q5T4S7 PPA1-206ENST00000625364 644 ntTSL 5 BASIC10.06□□□□□ -0.8
UBR4Q5T4S7 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
UBR4Q5T4S7 GOLGA2P6-201ENST00000340929 2049 ntBASIC10.06□□□□□ -0.8
UBR4Q5T4S7 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC10.06□□□□□ -0.8
UBR4Q5T4S7 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC10.06□□□□□ -0.8
UBR4Q5T4S7 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
UBR4Q5T4S7 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC10.06□□□□□ -0.8
UBR4Q5T4S7 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
UBR4Q5T4S7 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
UBR4Q5T4S7 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
UBR4Q5T4S7 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC10.06□□□□□ -0.8
UBR4Q5T4S7 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC10.06□□□□□ -0.8
UBR4Q5T4S7 AC017083.2-201ENST00000608069 979 ntBASIC10.06□□□□□ -0.8
UBR4Q5T4S7 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC10.06□□□□□ -0.8
UBR4Q5T4S7 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
UBR4Q5T4S7 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
UBR4Q5T4S7 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
UBR4Q5T4S7 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
UBR4Q5T4S7 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
UBR4Q5T4S7 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
UBR4Q5T4S7 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
UBR4Q5T4S7 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
UBR4Q5T4S7 OR7E47P-204ENST00000575924 449 ntBASIC10.06□□□□□ -0.8
UBR4Q5T4S7 AC099568.2-201ENST00000609194 695 ntBASIC10.06□□□□□ -0.8
UBR4Q5T4S7 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC10.06□□□□□ -0.8
UBR4Q5T4S7 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
UBR4Q5T4S7 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC10.06□□□□□ -0.8
UBR4Q5T4S7 KRT8P19-201ENST00000551916 1455 ntBASIC10.06□□□□□ -0.8
UBR4Q5T4S7 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC10.06□□□□□ -0.8
UBR4Q5T4S7 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
UBR4Q5T4S7 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
UBR4Q5T4S7 RPF1-202ENST00000370656 724 ntTSL 2 BASIC10.05□□□□□ -0.8
UBR4Q5T4S7 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC10.05□□□□□ -0.8
UBR4Q5T4S7 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC10.05□□□□□ -0.8
UBR4Q5T4S7 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC10.05□□□□□ -0.8
UBR4Q5T4S7 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC10.05□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms