Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
CERKLQ49MI3 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CERKLQ49MI3 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC21.63■■□□□ 1.05
CERKLQ49MI3 GUSBP12-201ENST00000513727 720 ntBASIC21.63■■□□□ 1.05
CERKLQ49MI3 AC111152.3-201ENST00000569699 673 ntBASIC21.63■■□□□ 1.05
CERKLQ49MI3 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC21.63■■□□□ 1.05
CERKLQ49MI3 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CERKLQ49MI3 AC124864.1-201ENST00000623408 392 ntBASIC21.63■■□□□ 1.05
CERKLQ49MI3 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC21.63■■□□□ 1.05
CERKLQ49MI3 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CERKLQ49MI3 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC21.63■■□□□ 1.05
CERKLQ49MI3 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC21.63■■□□□ 1.05
CERKLQ49MI3 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC21.63■■□□□ 1.05
CERKLQ49MI3 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CERKLQ49MI3 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CERKLQ49MI3 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CERKLQ49MI3 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CERKLQ49MI3 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CERKLQ49MI3 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
CERKLQ49MI3 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC21.62■■□□□ 1.05
CERKLQ49MI3 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CERKLQ49MI3 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CERKLQ49MI3 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CERKLQ49MI3 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
CERKLQ49MI3 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
CERKLQ49MI3 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CERKLQ49MI3 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CERKLQ49MI3 MIR149-201ENST00000384879 89 ntBASIC21.62■■□□□ 1.05
CERKLQ49MI3 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC21.62■■□□□ 1.05
CERKLQ49MI3 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC21.62■■□□□ 1.05
CERKLQ49MI3 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC21.62■■□□□ 1.05
CERKLQ49MI3 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC21.62■■□□□ 1.05
CERKLQ49MI3 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CERKLQ49MI3 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CERKLQ49MI3 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CERKLQ49MI3 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC21.62■■□□□ 1.05
CERKLQ49MI3 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CERKLQ49MI3 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CERKLQ49MI3 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CERKLQ49MI3 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CERKLQ49MI3 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CERKLQ49MI3 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CERKLQ49MI3 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CERKLQ49MI3 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.61■■□□□ 1.05
CERKLQ49MI3 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CERKLQ49MI3 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CERKLQ49MI3 HES2-202ENST00000377836 507 ntTSL 2 BASIC21.61■■□□□ 1.05
CERKLQ49MI3 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC21.61■■□□□ 1.05
CERKLQ49MI3 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC21.61■■□□□ 1.05
CERKLQ49MI3 TSPY19P-201ENST00000418461 509 ntBASIC21.61■■□□□ 1.05
CERKLQ49MI3 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
CERKLQ49MI3 TSPY18P-201ENST00000441642 509 ntBASIC21.61■■□□□ 1.05
CERKLQ49MI3 RN7SL606P-201ENST00000472779 293 ntBASIC21.61■■□□□ 1.05
CERKLQ49MI3 AC104819.1-201ENST00000504587 486 ntBASIC21.61■■□□□ 1.05
CERKLQ49MI3 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC21.61■■□□□ 1.05
CERKLQ49MI3 AL592071.1-201ENST00000611956 408 ntBASIC21.61■■□□□ 1.05
CERKLQ49MI3 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CERKLQ49MI3 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CERKLQ49MI3 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CERKLQ49MI3 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CERKLQ49MI3 AC099343.3-201ENST00000605834 2503 ntBASIC21.61■■□□□ 1.05
CERKLQ49MI3 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CERKLQ49MI3 AC233702.3-201ENST00000578656 1387 ntBASIC21.61■■□□□ 1.05
CERKLQ49MI3 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CERKLQ49MI3 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CERKLQ49MI3 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC21.6■■□□□ 1.05
CERKLQ49MI3 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CERKLQ49MI3 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CERKLQ49MI3 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CERKLQ49MI3 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
CERKLQ49MI3 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC21.6■■□□□ 1.05
CERKLQ49MI3 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
CERKLQ49MI3 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CERKLQ49MI3 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC21.6■■□□□ 1.05
CERKLQ49MI3 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC21.6■■□□□ 1.05
CERKLQ49MI3 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CERKLQ49MI3 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC21.6■■□□□ 1.05
CERKLQ49MI3 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC21.6■■□□□ 1.05
CERKLQ49MI3 AL845331.1-201ENST00000424978 1190 ntBASIC21.6■■□□□ 1.05
CERKLQ49MI3 FOSL1P1-201ENST00000511041 816 ntBASIC21.6■■□□□ 1.05
CERKLQ49MI3 AC074051.2-201ENST00000565115 352 ntBASIC21.6■■□□□ 1.05
CERKLQ49MI3 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CERKLQ49MI3 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CERKLQ49MI3 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CERKLQ49MI3 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
CERKLQ49MI3 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CERKLQ49MI3 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
CERKLQ49MI3 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CERKLQ49MI3 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CERKLQ49MI3 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CERKLQ49MI3 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CERKLQ49MI3 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC21.59■■□□□ 1.05
CERKLQ49MI3 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CERKLQ49MI3 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CERKLQ49MI3 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
CERKLQ49MI3 AC009102.3-201ENST00000623118 1491 ntBASIC21.59■■□□□ 1.05
CERKLQ49MI3 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
CERKLQ49MI3 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
CERKLQ49MI3 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CERKLQ49MI3 UROS-202ENST00000368778 1556 ntTSL 2 BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms