Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CTC1Q2NKJ3 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CTC1Q2NKJ3 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CTC1Q2NKJ3 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
CTC1Q2NKJ3 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTC1Q2NKJ3 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTC1Q2NKJ3 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTC1Q2NKJ3 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CTC1Q2NKJ3 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.78■□□□□ 0.76
CTC1Q2NKJ3 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
CTC1Q2NKJ3 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CTC1Q2NKJ3 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CTC1Q2NKJ3 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTC1Q2NKJ3 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.78■□□□□ 0.76
CTC1Q2NKJ3 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
CTC1Q2NKJ3 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTC1Q2NKJ3 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTC1Q2NKJ3 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTC1Q2NKJ3 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.78■□□□□ 0.76
CTC1Q2NKJ3 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.78■□□□□ 0.76
CTC1Q2NKJ3 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CTC1Q2NKJ3 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.78■□□□□ 0.76
CTC1Q2NKJ3 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.77■□□□□ 0.76
CTC1Q2NKJ3 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.77■□□□□ 0.76
CTC1Q2NKJ3 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CTC1Q2NKJ3 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CTC1Q2NKJ3 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.77■□□□□ 0.76
CTC1Q2NKJ3 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CTC1Q2NKJ3 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
CTC1Q2NKJ3 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CTC1Q2NKJ3 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CTC1Q2NKJ3 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.77■□□□□ 0.76
CTC1Q2NKJ3 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CTC1Q2NKJ3 IGHV3-47-201ENST00000425060 335 ntBASIC19.77■□□□□ 0.76
CTC1Q2NKJ3 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CTC1Q2NKJ3 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CTC1Q2NKJ3 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.77■□□□□ 0.76
CTC1Q2NKJ3 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.77■□□□□ 0.76
CTC1Q2NKJ3 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CTC1Q2NKJ3 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.77■□□□□ 0.76
CTC1Q2NKJ3 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.77■□□□□ 0.76
CTC1Q2NKJ3 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.77■□□□□ 0.76
CTC1Q2NKJ3 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CTC1Q2NKJ3 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CTC1Q2NKJ3 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.76■□□□□ 0.75
CTC1Q2NKJ3 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTC1Q2NKJ3 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CTC1Q2NKJ3 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTC1Q2NKJ3 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CTC1Q2NKJ3 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CTC1Q2NKJ3 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CTC1Q2NKJ3 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTC1Q2NKJ3 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTC1Q2NKJ3 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.76■□□□□ 0.75
CTC1Q2NKJ3 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.76■□□□□ 0.75
CTC1Q2NKJ3 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.76■□□□□ 0.75
CTC1Q2NKJ3 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC19.76■□□□□ 0.75
CTC1Q2NKJ3 AC005332.3-201ENST00000589904 676 ntBASIC19.76■□□□□ 0.75
CTC1Q2NKJ3 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTC1Q2NKJ3 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CTC1Q2NKJ3 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CTC1Q2NKJ3 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTC1Q2NKJ3 AL691432.2-201ENST00000607222 2038 ntBASIC19.76■□□□□ 0.75
CTC1Q2NKJ3 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.76■□□□□ 0.75
CTC1Q2NKJ3 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTC1Q2NKJ3 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CTC1Q2NKJ3 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.75■□□□□ 0.75
CTC1Q2NKJ3 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CTC1Q2NKJ3 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTC1Q2NKJ3 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC19.75■□□□□ 0.75
CTC1Q2NKJ3 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.75■□□□□ 0.75
CTC1Q2NKJ3 SAPCD2P3-201ENST00000455031 850 ntBASIC19.75■□□□□ 0.75
CTC1Q2NKJ3 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CTC1Q2NKJ3 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC19.75■□□□□ 0.75
CTC1Q2NKJ3 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC19.75■□□□□ 0.75
CTC1Q2NKJ3 FICD-205ENST00000552758 603 ntTSL 2 BASIC19.75■□□□□ 0.75
CTC1Q2NKJ3 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
CTC1Q2NKJ3 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.75■□□□□ 0.75
CTC1Q2NKJ3 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.75■□□□□ 0.75
CTC1Q2NKJ3 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.75■□□□□ 0.75
CTC1Q2NKJ3 AC099336.1-202ENST00000602961 463 ntBASIC19.75■□□□□ 0.75
CTC1Q2NKJ3 AL390719.2-201ENST00000606993 987 ntBASIC19.75■□□□□ 0.75
CTC1Q2NKJ3 REXO1L6P-202ENST00000619970 1078 ntBASIC19.75■□□□□ 0.75
CTC1Q2NKJ3 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
CTC1Q2NKJ3 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTC1Q2NKJ3 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.75■□□□□ 0.75
CTC1Q2NKJ3 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTC1Q2NKJ3 LINC00167-201ENST00000530583 1419 ntBASIC19.75■□□□□ 0.75
CTC1Q2NKJ3 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC19.75■□□□□ 0.75
CTC1Q2NKJ3 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTC1Q2NKJ3 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTC1Q2NKJ3 IL9RP2-201ENST00000423948 1312 ntBASIC19.75■□□□□ 0.75
CTC1Q2NKJ3 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.75■□□□□ 0.75
CTC1Q2NKJ3 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC19.75■□□□□ 0.75
CTC1Q2NKJ3 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC19.75■□□□□ 0.75
CTC1Q2NKJ3 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CTC1Q2NKJ3 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
CTC1Q2NKJ3 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.74■□□□□ 0.75
CTC1Q2NKJ3 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.74■□□□□ 0.75
CTC1Q2NKJ3 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms