Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 TERF1P1-201ENST00000311003 1181 ntBASIC18.06■□□□□ 0.48
YBX1P67809 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
YBX1P67809 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
YBX1P67809 RCN1P1-201ENST00000400413 996 ntBASIC18.06■□□□□ 0.48
YBX1P67809 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
YBX1P67809 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.06■□□□□ 0.48
YBX1P67809 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.06■□□□□ 0.48
YBX1P67809 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.06■□□□□ 0.48
YBX1P67809 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
YBX1P67809 AC005363.2-201ENST00000618631 242 ntBASIC18.06■□□□□ 0.48
YBX1P67809 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.06■□□□□ 0.48
YBX1P67809 AL357033.4-201ENST00000617703 1807 ntBASIC18.06■□□□□ 0.48
YBX1P67809 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
YBX1P67809 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.06■□□□□ 0.48
YBX1P67809 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.06■□□□□ 0.48
YBX1P67809 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
YBX1P67809 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
YBX1P67809 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
YBX1P67809 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
YBX1P67809 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
YBX1P67809 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.06■□□□□ 0.48
YBX1P67809 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
YBX1P67809 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
YBX1P67809 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
YBX1P67809 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
YBX1P67809 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
YBX1P67809 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.05■□□□□ 0.48
YBX1P67809 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
YBX1P67809 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
YBX1P67809 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
YBX1P67809 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
YBX1P67809 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
YBX1P67809 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
YBX1P67809 HMGA1P5-201ENST00000412453 271 ntBASIC18.05■□□□□ 0.48
YBX1P67809 AC113347.1-201ENST00000413321 391 ntBASIC18.05■□□□□ 0.48
YBX1P67809 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.05■□□□□ 0.48
YBX1P67809 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
YBX1P67809 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
YBX1P67809 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.05■□□□□ 0.48
YBX1P67809 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
YBX1P67809 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
YBX1P67809 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.05■□□□□ 0.48
YBX1P67809 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
YBX1P67809 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
YBX1P67809 AL109659.2-201ENST00000606809 1674 ntBASIC18.05■□□□□ 0.48
YBX1P67809 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
YBX1P67809 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
YBX1P67809 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
YBX1P67809 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
YBX1P67809 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
YBX1P67809 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
YBX1P67809 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
YBX1P67809 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
YBX1P67809 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
YBX1P67809 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
YBX1P67809 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
YBX1P67809 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.04■□□□□ 0.48
YBX1P67809 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
YBX1P67809 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
YBX1P67809 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.04■□□□□ 0.48
YBX1P67809 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.04■□□□□ 0.48
YBX1P67809 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
YBX1P67809 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.04■□□□□ 0.48
YBX1P67809 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.04■□□□□ 0.48
YBX1P67809 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
YBX1P67809 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
YBX1P67809 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
YBX1P67809 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
YBX1P67809 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
YBX1P67809 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.04■□□□□ 0.48
YBX1P67809 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.04■□□□□ 0.48
YBX1P67809 MCCD1P1-208ENST00000445732 328 ntBASIC18.04■□□□□ 0.48
YBX1P67809 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.04■□□□□ 0.48
YBX1P67809 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.04■□□□□ 0.48
YBX1P67809 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
YBX1P67809 AL138966.2-201ENST00000621997 464 ntBASIC18.04■□□□□ 0.48
YBX1P67809 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
YBX1P67809 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
YBX1P67809 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
YBX1P67809 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
YBX1P67809 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.04■□□□□ 0.48
YBX1P67809 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
YBX1P67809 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.04■□□□□ 0.48
YBX1P67809 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
YBX1P67809 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
YBX1P67809 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.04■□□□□ 0.48
YBX1P67809 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.03■□□□□ 0.48
YBX1P67809 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
YBX1P67809 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
YBX1P67809 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
YBX1P67809 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
YBX1P67809 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
YBX1P67809 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
YBX1P67809 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
YBX1P67809 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
YBX1P67809 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.03■□□□□ 0.48
YBX1P67809 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.03■□□□□ 0.48
YBX1P67809 KRT18P21-201ENST00000515767 1272 ntBASIC18.03■□□□□ 0.48
YBX1P67809 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.03■□□□□ 0.48
YBX1P67809 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms