Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CXCR4P61073 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CXCR4P61073 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CXCR4P61073 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CXCR4P61073 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.88■□□□□ 0.29
CXCR4P61073 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CXCR4P61073 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CXCR4P61073 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CXCR4P61073 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CXCR4P61073 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CXCR4P61073 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CXCR4P61073 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CXCR4P61073 KRT8P32-201ENST00000512863 1461 ntBASIC16.88■□□□□ 0.29
CXCR4P61073 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.88■□□□□ 0.29
CXCR4P61073 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CXCR4P61073 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
CXCR4P61073 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CXCR4P61073 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
CXCR4P61073 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CXCR4P61073 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CXCR4P61073 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC16.88■□□□□ 0.29
CXCR4P61073 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CXCR4P61073 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CXCR4P61073 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CXCR4P61073 PPP1R14BP3-201ENST00000509033 445 ntBASIC16.88■□□□□ 0.29
CXCR4P61073 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC16.88■□□□□ 0.29
CXCR4P61073 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CXCR4P61073 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CXCR4P61073 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.88■□□□□ 0.29
CXCR4P61073 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CXCR4P61073 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CXCR4P61073 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.88■□□□□ 0.29
CXCR4P61073 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CXCR4P61073 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CXCR4P61073 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CXCR4P61073 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CXCR4P61073 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CXCR4P61073 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CXCR4P61073 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CXCR4P61073 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CXCR4P61073 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CXCR4P61073 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CXCR4P61073 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.87■□□□□ 0.29
CXCR4P61073 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.87■□□□□ 0.29
CXCR4P61073 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.87■□□□□ 0.29
CXCR4P61073 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.87■□□□□ 0.29
CXCR4P61073 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CXCR4P61073 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CXCR4P61073 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CXCR4P61073 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CXCR4P61073 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CXCR4P61073 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CXCR4P61073 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.87■□□□□ 0.29
CXCR4P61073 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.87■□□□□ 0.29
CXCR4P61073 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CXCR4P61073 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
CXCR4P61073 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC16.87■□□□□ 0.29
CXCR4P61073 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CXCR4P61073 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CXCR4P61073 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC16.87■□□□□ 0.29
CXCR4P61073 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CXCR4P61073 SOX15-203ENST00000570788 1093 ntBASIC16.87■□□□□ 0.29
CXCR4P61073 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.87■□□□□ 0.29
CXCR4P61073 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.87■□□□□ 0.29
CXCR4P61073 PFKL-212ENST00000628044 129 ntTSL 3 BASIC16.87■□□□□ 0.29
CXCR4P61073 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.87■□□□□ 0.29
CXCR4P61073 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CXCR4P61073 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CXCR4P61073 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CXCR4P61073 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CXCR4P61073 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CXCR4P61073 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CXCR4P61073 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.87■□□□□ 0.29
CXCR4P61073 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CXCR4P61073 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CXCR4P61073 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CXCR4P61073 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CXCR4P61073 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CXCR4P61073 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.86■□□□□ 0.29
CXCR4P61073 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CXCR4P61073 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CXCR4P61073 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CXCR4P61073 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CXCR4P61073 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CXCR4P61073 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CXCR4P61073 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CXCR4P61073 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CXCR4P61073 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CXCR4P61073 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CXCR4P61073 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CXCR4P61073 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CXCR4P61073 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CXCR4P61073 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CXCR4P61073 NCF1B-203ENST00000435988 1254 ntBASIC16.86■□□□□ 0.29
CXCR4P61073 AC008687.6-201ENST00000596318 630 ntBASIC16.86■□□□□ 0.29
CXCR4P61073 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CXCR4P61073 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC16.86■□□□□ 0.29
CXCR4P61073 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.86■□□□□ 0.29
CXCR4P61073 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CXCR4P61073 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms