Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
ERVFC1-1P60608 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
ERVFC1-1P60608 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC14.39□□□□□ -0.11
ERVFC1-1P60608 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
ERVFC1-1P60608 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ERVFC1-1P60608 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
ERVFC1-1P60608 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ERVFC1-1P60608 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ERVFC1-1P60608 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ERVFC1-1P60608 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
ERVFC1-1P60608 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC14.39□□□□□ -0.11
ERVFC1-1P60608 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ERVFC1-1P60608 DLX3-202ENST00000512495 834 ntTSL 2 BASIC14.39□□□□□ -0.11
ERVFC1-1P60608 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC14.39□□□□□ -0.11
ERVFC1-1P60608 MFSD11-216ENST00000590393 1141 ntBASIC14.39□□□□□ -0.11
ERVFC1-1P60608 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC14.39□□□□□ -0.11
ERVFC1-1P60608 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
ERVFC1-1P60608 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC14.39□□□□□ -0.11
ERVFC1-1P60608 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.39□□□□□ -0.11
ERVFC1-1P60608 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC14.39□□□□□ -0.11
ERVFC1-1P60608 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ERVFC1-1P60608 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC14.39□□□□□ -0.11
ERVFC1-1P60608 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ERVFC1-1P60608 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ERVFC1-1P60608 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
ERVFC1-1P60608 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC14.39□□□□□ -0.11
ERVFC1-1P60608 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
ERVFC1-1P60608 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ERVFC1-1P60608 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ERVFC1-1P60608 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
ERVFC1-1P60608 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ERVFC1-1P60608 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ERVFC1-1P60608 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC14.38□□□□□ -0.11
ERVFC1-1P60608 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
ERVFC1-1P60608 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ERVFC1-1P60608 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ERVFC1-1P60608 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ERVFC1-1P60608 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC14.38□□□□□ -0.11
ERVFC1-1P60608 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
ERVFC1-1P60608 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
ERVFC1-1P60608 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC14.38□□□□□ -0.11
ERVFC1-1P60608 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ERVFC1-1P60608 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ERVFC1-1P60608 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
ERVFC1-1P60608 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ERVFC1-1P60608 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ERVFC1-1P60608 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC14.38□□□□□ -0.11
ERVFC1-1P60608 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC14.38□□□□□ -0.11
ERVFC1-1P60608 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC14.38□□□□□ -0.11
ERVFC1-1P60608 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC14.38□□□□□ -0.11
ERVFC1-1P60608 AC092437.1-201ENST00000624794 1048 ntBASIC14.38□□□□□ -0.11
ERVFC1-1P60608 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC14.38□□□□□ -0.11
ERVFC1-1P60608 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
ERVFC1-1P60608 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ERVFC1-1P60608 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
ERVFC1-1P60608 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
ERVFC1-1P60608 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ERVFC1-1P60608 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC14.38□□□□□ -0.11
ERVFC1-1P60608 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ERVFC1-1P60608 AC104417.2-201ENST00000562989 1793 ntBASIC14.37□□□□□ -0.11
ERVFC1-1P60608 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ERVFC1-1P60608 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC14.37□□□□□ -0.11
ERVFC1-1P60608 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
ERVFC1-1P60608 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ERVFC1-1P60608 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
ERVFC1-1P60608 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC14.37□□□□□ -0.11
ERVFC1-1P60608 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC14.37□□□□□ -0.11
ERVFC1-1P60608 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ERVFC1-1P60608 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ERVFC1-1P60608 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ERVFC1-1P60608 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
ERVFC1-1P60608 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ERVFC1-1P60608 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ERVFC1-1P60608 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ERVFC1-1P60608 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC14.37□□□□□ -0.11
ERVFC1-1P60608 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC14.37□□□□□ -0.11
ERVFC1-1P60608 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC14.37□□□□□ -0.11
ERVFC1-1P60608 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ERVFC1-1P60608 KRT19P1-201ENST00000405746 1186 ntBASIC14.37□□□□□ -0.11
ERVFC1-1P60608 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC14.37□□□□□ -0.11
ERVFC1-1P60608 VPS53-216ENST00000574029 585 ntTSL 4 BASIC14.37□□□□□ -0.11
ERVFC1-1P60608 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC14.37□□□□□ -0.11
ERVFC1-1P60608 AL591742.1-201ENST00000604433 565 ntBASIC14.37□□□□□ -0.11
ERVFC1-1P60608 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ERVFC1-1P60608 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ERVFC1-1P60608 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
ERVFC1-1P60608 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ERVFC1-1P60608 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
ERVFC1-1P60608 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
ERVFC1-1P60608 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ERVFC1-1P60608 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC14.37□□□□□ -0.11
ERVFC1-1P60608 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ERVFC1-1P60608 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.37□□□□□ -0.11
ERVFC1-1P60608 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ERVFC1-1P60608 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC14.37□□□□□ -0.11
ERVFC1-1P60608 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ERVFC1-1P60608 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ERVFC1-1P60608 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ERVFC1-1P60608 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ERVFC1-1P60608 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms