Protein–RNA interactions for Protein: P59942

MCCD1, Mitochondrial coiled-coil domain protein 1, humanhuman

Predicted RBP Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCCD1P59942 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
MCCD1P59942 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
MCCD1P59942 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
MCCD1P59942 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
MCCD1P59942 RASA4DP-201ENST00000460726 1199 ntBASIC19.83■□□□□ 0.77
MCCD1P59942 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.83■□□□□ 0.77
MCCD1P59942 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.83■□□□□ 0.77
MCCD1P59942 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.83■□□□□ 0.77
MCCD1P59942 AC079602.3-201ENST00000623931 403 ntBASIC19.83■□□□□ 0.77
MCCD1P59942 AL023973.1-201ENST00000624619 620 ntBASIC19.83■□□□□ 0.77
MCCD1P59942 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
MCCD1P59942 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
MCCD1P59942 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
MCCD1P59942 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
MCCD1P59942 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
MCCD1P59942 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
MCCD1P59942 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.82■□□□□ 0.76
MCCD1P59942 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
MCCD1P59942 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MCCD1P59942 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
MCCD1P59942 AC104076.2-201ENST00000448912 469 ntBASIC19.82■□□□□ 0.76
MCCD1P59942 AC113404.2-201ENST00000507884 177 ntBASIC19.82■□□□□ 0.76
MCCD1P59942 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
MCCD1P59942 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
MCCD1P59942 AC139887.4-201ENST00000607877 719 ntBASIC19.82■□□□□ 0.76
MCCD1P59942 HYMAI.1-201ENST00000620949 238 ntBASIC19.82■□□□□ 0.76
MCCD1P59942 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
MCCD1P59942 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
MCCD1P59942 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.82■□□□□ 0.76
MCCD1P59942 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
MCCD1P59942 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
MCCD1P59942 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
MCCD1P59942 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
MCCD1P59942 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MCCD1P59942 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MCCD1P59942 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.81■□□□□ 0.76
MCCD1P59942 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.81■□□□□ 0.76
MCCD1P59942 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.81■□□□□ 0.76
MCCD1P59942 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MCCD1P59942 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.81■□□□□ 0.76
MCCD1P59942 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MCCD1P59942 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
MCCD1P59942 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MCCD1P59942 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.81■□□□□ 0.76
MCCD1P59942 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.81■□□□□ 0.76
MCCD1P59942 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.81■□□□□ 0.76
MCCD1P59942 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MCCD1P59942 RCN1P1-201ENST00000400413 996 ntBASIC19.81■□□□□ 0.76
MCCD1P59942 LIN28AP1-201ENST00000429574 405 ntBASIC19.81■□□□□ 0.76
MCCD1P59942 DUTP2-201ENST00000519164 463 ntBASIC19.81■□□□□ 0.76
MCCD1P59942 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.81■□□□□ 0.76
MCCD1P59942 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
MCCD1P59942 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MCCD1P59942 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MCCD1P59942 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
MCCD1P59942 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.81■□□□□ 0.76
MCCD1P59942 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.81■□□□□ 0.76
MCCD1P59942 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.81■□□□□ 0.76
MCCD1P59942 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.81■□□□□ 0.76
MCCD1P59942 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.8■□□□□ 0.76
MCCD1P59942 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MCCD1P59942 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
MCCD1P59942 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MCCD1P59942 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
MCCD1P59942 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MCCD1P59942 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.8■□□□□ 0.76
MCCD1P59942 TSPY5P-201ENST00000426936 936 ntBASIC19.8■□□□□ 0.76
MCCD1P59942 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.8■□□□□ 0.76
MCCD1P59942 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.8■□□□□ 0.76
MCCD1P59942 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
MCCD1P59942 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.8■□□□□ 0.76
MCCD1P59942 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.8■□□□□ 0.76
MCCD1P59942 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
MCCD1P59942 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
MCCD1P59942 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
MCCD1P59942 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MCCD1P59942 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
MCCD1P59942 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.8■□□□□ 0.76
MCCD1P59942 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
MCCD1P59942 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
MCCD1P59942 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
MCCD1P59942 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
MCCD1P59942 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.8■□□□□ 0.76
MCCD1P59942 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MCCD1P59942 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
MCCD1P59942 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MCCD1P59942 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
MCCD1P59942 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MCCD1P59942 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
MCCD1P59942 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.79■□□□□ 0.76
MCCD1P59942 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
MCCD1P59942 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
MCCD1P59942 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.79■□□□□ 0.76
MCCD1P59942 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
MCCD1P59942 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.79■□□□□ 0.76
MCCD1P59942 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.79■□□□□ 0.76
MCCD1P59942 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
MCCD1P59942 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
MCCD1P59942 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
MCCD1P59942 RNF152P1-201ENST00000397754 604 ntBASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms