Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
CLDN12P56749 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.12■□□□□ 0.17
CLDN12P56749 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
CLDN12P56749 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN12P56749 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN12P56749 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN12P56749 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.12■□□□□ 0.17
CLDN12P56749 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.11■□□□□ 0.17
CLDN12P56749 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN12P56749 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN12P56749 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN12P56749 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC16.11■□□□□ 0.17
CLDN12P56749 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN12P56749 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.11■□□□□ 0.17
CLDN12P56749 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN12P56749 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CLDN12P56749 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.11■□□□□ 0.17
CLDN12P56749 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN12P56749 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.11■□□□□ 0.17
CLDN12P56749 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN12P56749 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN12P56749 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN12P56749 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN12P56749 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CLDN12P56749 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN12P56749 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN12P56749 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN12P56749 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN12P56749 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.11■□□□□ 0.17
CLDN12P56749 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC16.11■□□□□ 0.17
CLDN12P56749 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC16.11■□□□□ 0.17
CLDN12P56749 AC008687.6-201ENST00000596318 630 ntBASIC16.11■□□□□ 0.17
CLDN12P56749 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN12P56749 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN12P56749 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
CLDN12P56749 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN12P56749 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN12P56749 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC16.11■□□□□ 0.17
CLDN12P56749 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN12P56749 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.11■□□□□ 0.17
CLDN12P56749 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN12P56749 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN12P56749 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN12P56749 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN12P56749 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC16.11■□□□□ 0.17
CLDN12P56749 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CLDN12P56749 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN12P56749 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.11■□□□□ 0.17
CLDN12P56749 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN12P56749 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC16.11■□□□□ 0.17
CLDN12P56749 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CLDN12P56749 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN12P56749 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CLDN12P56749 AL357033.4-201ENST00000617703 1807 ntBASIC16.1■□□□□ 0.17
CLDN12P56749 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN12P56749 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN12P56749 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
CLDN12P56749 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN12P56749 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.1■□□□□ 0.17
CLDN12P56749 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN12P56749 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN12P56749 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.1■□□□□ 0.17
CLDN12P56749 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN12P56749 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.1■□□□□ 0.17
CLDN12P56749 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CLDN12P56749 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN12P56749 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN12P56749 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN12P56749 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC16.1■□□□□ 0.17
CLDN12P56749 PPP1R14BP2-201ENST00000426284 444 ntBASIC16.1■□□□□ 0.17
CLDN12P56749 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC16.1■□□□□ 0.17
CLDN12P56749 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC16.1■□□□□ 0.17
CLDN12P56749 AC097658.1-201ENST00000475555 843 ntBASIC16.1■□□□□ 0.17
CLDN12P56749 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN12P56749 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC16.1■□□□□ 0.17
CLDN12P56749 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC16.1■□□□□ 0.17
CLDN12P56749 AL121832.2-201ENST00000610979 668 ntBASIC16.1■□□□□ 0.17
CLDN12P56749 IKBKGP1-201ENST00000612193 1073 ntBASIC16.1■□□□□ 0.17
CLDN12P56749 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC16.1■□□□□ 0.17
CLDN12P56749 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN12P56749 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CLDN12P56749 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN12P56749 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CLDN12P56749 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CLDN12P56749 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.1■□□□□ 0.17
CLDN12P56749 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN12P56749 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN12P56749 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CLDN12P56749 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN12P56749 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.1■□□□□ 0.17
CLDN12P56749 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.1■□□□□ 0.17
CLDN12P56749 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN12P56749 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
CLDN12P56749 AC080080.1-201ENST00000625121 2420 ntBASIC16.09■□□□□ 0.17
CLDN12P56749 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN12P56749 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN12P56749 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.09■□□□□ 0.17
CLDN12P56749 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN12P56749 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN12P56749 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms