Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.13■□□□□ 0.49
CDH13P55290 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDH13P55290 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDH13P55290 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.13■□□□□ 0.49
CDH13P55290 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDH13P55290 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDH13P55290 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDH13P55290 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CDH13P55290 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.13■□□□□ 0.49
CDH13P55290 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDH13P55290 KRT18P29-201ENST00000397031 1267 ntBASIC18.13■□□□□ 0.49
CDH13P55290 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.13■□□□□ 0.49
CDH13P55290 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.13■□□□□ 0.49
CDH13P55290 CD177P1-201ENST00000606252 935 ntBASIC18.13■□□□□ 0.49
CDH13P55290 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.13■□□□□ 0.49
CDH13P55290 ITM2C-210ENST00000620962 501 ntBASIC18.13■□□□□ 0.49
CDH13P55290 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDH13P55290 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDH13P55290 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
CDH13P55290 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDH13P55290 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.13■□□□□ 0.49
CDH13P55290 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.13■□□□□ 0.49
CDH13P55290 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDH13P55290 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CDH13P55290 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.13■□□□□ 0.49
CDH13P55290 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDH13P55290 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDH13P55290 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDH13P55290 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDH13P55290 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.13■□□□□ 0.49
CDH13P55290 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDH13P55290 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.13■□□□□ 0.49
CDH13P55290 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDH13P55290 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CDH13P55290 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.12■□□□□ 0.49
CDH13P55290 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.12■□□□□ 0.49
CDH13P55290 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDH13P55290 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDH13P55290 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.12■□□□□ 0.49
CDH13P55290 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.12■□□□□ 0.49
CDH13P55290 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDH13P55290 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CDH13P55290 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDH13P55290 ESPNP-201ENST00000270691 2015 ntBASIC18.12■□□□□ 0.49
CDH13P55290 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDH13P55290 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
CDH13P55290 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.12■□□□□ 0.49
CDH13P55290 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CDH13P55290 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.12■□□□□ 0.49
CDH13P55290 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.12■□□□□ 0.49
CDH13P55290 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.12■□□□□ 0.49
CDH13P55290 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.12■□□□□ 0.49
CDH13P55290 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
CDH13P55290 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CDH13P55290 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDH13P55290 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.12■□□□□ 0.49
CDH13P55290 AC099343.3-201ENST00000605834 2503 ntBASIC18.12■□□□□ 0.49
CDH13P55290 MYLKP1-201ENST00000509077 1580 ntBASIC18.12■□□□□ 0.49
CDH13P55290 AL109659.2-201ENST00000606809 1674 ntBASIC18.12■□□□□ 0.49
CDH13P55290 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CDH13P55290 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH13P55290 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CDH13P55290 BCL2-203ENST00000589955 5011 ntBASIC18.11■□□□□ 0.49
CDH13P55290 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.11■□□□□ 0.49
CDH13P55290 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH13P55290 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDH13P55290 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.11■□□□□ 0.49
CDH13P55290 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH13P55290 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.11■□□□□ 0.49
CDH13P55290 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.11■□□□□ 0.49
CDH13P55290 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CDH13P55290 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.11■□□□□ 0.49
CDH13P55290 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.11■□□□□ 0.49
CDH13P55290 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH13P55290 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
CDH13P55290 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.11■□□□□ 0.49
CDH13P55290 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDH13P55290 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CDH13P55290 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH13P55290 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH13P55290 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.11■□□□□ 0.49
CDH13P55290 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.11■□□□□ 0.49
CDH13P55290 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH13P55290 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH13P55290 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH13P55290 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH13P55290 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH13P55290 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH13P55290 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH13P55290 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
CDH13P55290 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.1■□□□□ 0.49
CDH13P55290 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDH13P55290 AC093677.2-201ENST00000600169 1863 ntBASIC18.1■□□□□ 0.49
CDH13P55290 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CDH13P55290 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDH13P55290 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH13P55290 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH13P55290 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.1■□□□□ 0.49
CDH13P55290 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.1■□□□□ 0.49
CDH13P55290 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms