Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.99■□□□□ 0.31
CDH11P55287 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.99■□□□□ 0.31
CDH11P55287 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CDH11P55287 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CDH11P55287 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDH11P55287 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDH11P55287 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
CDH11P55287 AL162741.1-201ENST00000565563 1558 ntBASIC16.99■□□□□ 0.31
CDH11P55287 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.99■□□□□ 0.31
CDH11P55287 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CDH11P55287 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDH11P55287 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.99■□□□□ 0.31
CDH11P55287 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDH11P55287 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.99■□□□□ 0.31
CDH11P55287 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.99■□□□□ 0.31
CDH11P55287 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.99■□□□□ 0.31
CDH11P55287 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.99■□□□□ 0.31
CDH11P55287 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC16.99■□□□□ 0.31
CDH11P55287 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.99■□□□□ 0.31
CDH11P55287 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.99■□□□□ 0.31
CDH11P55287 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CDH11P55287 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.99■□□□□ 0.31
CDH11P55287 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.99■□□□□ 0.31
CDH11P55287 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.99■□□□□ 0.31
CDH11P55287 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDH11P55287 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CDH11P55287 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.99■□□□□ 0.31
CDH11P55287 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
CDH11P55287 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CDH11P55287 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CDH11P55287 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.99■□□□□ 0.31
CDH11P55287 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.99■□□□□ 0.31
CDH11P55287 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDH11P55287 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.99■□□□□ 0.31
CDH11P55287 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
CDH11P55287 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.98■□□□□ 0.31
CDH11P55287 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CDH11P55287 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.98■□□□□ 0.31
CDH11P55287 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.98■□□□□ 0.31
CDH11P55287 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH11P55287 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH11P55287 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
CDH11P55287 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH11P55287 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CDH11P55287 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.98■□□□□ 0.31
CDH11P55287 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH11P55287 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CDH11P55287 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH11P55287 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH11P55287 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CDH11P55287 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH11P55287 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CDH11P55287 TSPY15P-201ENST00000457163 923 ntBASIC16.98■□□□□ 0.31
CDH11P55287 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.98■□□□□ 0.31
CDH11P55287 AL353708.3-201ENST00000610272 989 ntBASIC16.98■□□□□ 0.31
CDH11P55287 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CDH11P55287 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CDH11P55287 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH11P55287 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH11P55287 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CDH11P55287 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.98■□□□□ 0.31
CDH11P55287 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CDH11P55287 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CDH11P55287 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
CDH11P55287 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH11P55287 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH11P55287 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH11P55287 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDH11P55287 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH11P55287 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH11P55287 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH11P55287 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDH11P55287 AP000997.3-201ENST00000623333 2250 ntBASIC16.97■□□□□ 0.31
CDH11P55287 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
CDH11P55287 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH11P55287 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
CDH11P55287 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDH11P55287 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.97■□□□□ 0.31
CDH11P55287 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDH11P55287 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH11P55287 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CDH11P55287 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH11P55287 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.97■□□□□ 0.31
CDH11P55287 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH11P55287 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDH11P55287 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH11P55287 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH11P55287 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDH11P55287 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
CDH11P55287 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH11P55287 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH11P55287 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH11P55287 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDH11P55287 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH11P55287 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDH11P55287 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH11P55287 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH11P55287 AC087499.1-201ENST00000418141 1075 ntBASIC16.96■□□□□ 0.31
CDH11P55287 NIFKP9-201ENST00000419265 221 ntBASIC16.96■□□□□ 0.31
CDH11P55287 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 636.1 ms