Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 MED29-202ENST00000594368 1471 ntTSL 2 BASIC20.86■□□□□ 0.93
LBX1P52954 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LBX1P52954 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LBX1P52954 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
LBX1P52954 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC20.85■□□□□ 0.93
LBX1P52954 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC20.85■□□□□ 0.93
LBX1P52954 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC20.85■□□□□ 0.93
LBX1P52954 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LBX1P52954 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LBX1P52954 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC20.85■□□□□ 0.93
LBX1P52954 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC20.85■□□□□ 0.93
LBX1P52954 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
LBX1P52954 NMU-203ENST00000507338 658 ntTSL 3 BASIC20.85■□□□□ 0.93
LBX1P52954 AC136632.2-201ENST00000512891 861 ntBASIC20.85■□□□□ 0.93
LBX1P52954 SDCCAG3P1-201ENST00000589292 1150 ntBASIC20.85■□□□□ 0.93
LBX1P52954 AC006557.2-201ENST00000592985 1240 ntBASIC20.85■□□□□ 0.93
LBX1P52954 YTHDF3-AS1-201ENST00000603538 718 ntBASIC20.85■□□□□ 0.93
LBX1P52954 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LBX1P52954 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.85■□□□□ 0.93
LBX1P52954 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LBX1P52954 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LBX1P52954 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LBX1P52954 AC009237.14-201ENST00000609975 1594 ntBASIC20.85■□□□□ 0.93
LBX1P52954 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LBX1P52954 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LBX1P52954 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LBX1P52954 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LBX1P52954 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LBX1P52954 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LBX1P52954 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
LBX1P52954 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LBX1P52954 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
LBX1P52954 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
LBX1P52954 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC20.84■□□□□ 0.93
LBX1P52954 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC20.84■□□□□ 0.93
LBX1P52954 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC20.84■□□□□ 0.93
LBX1P52954 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC20.84■□□□□ 0.93
LBX1P52954 BX005266.1-201ENST00000473402 457 ntBASIC20.84■□□□□ 0.93
LBX1P52954 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
LBX1P52954 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC20.84■□□□□ 0.93
LBX1P52954 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC20.84■□□□□ 0.93
LBX1P52954 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LBX1P52954 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.84■□□□□ 0.93
LBX1P52954 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
LBX1P52954 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
LBX1P52954 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LBX1P52954 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LBX1P52954 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
LBX1P52954 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC20.84■□□□□ 0.93
LBX1P52954 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LBX1P52954 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
LBX1P52954 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LBX1P52954 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LBX1P52954 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.83■□□□□ 0.93
LBX1P52954 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.83■□□□□ 0.93
LBX1P52954 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
LBX1P52954 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.93
LBX1P52954 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LBX1P52954 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LBX1P52954 TFAMP1-201ENST00000412727 736 ntBASIC20.83■□□□□ 0.93
LBX1P52954 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC20.83■□□□□ 0.93
LBX1P52954 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC20.83■□□□□ 0.93
LBX1P52954 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC20.83■□□□□ 0.93
LBX1P52954 AP005018.1-201ENST00000525475 301 ntBASIC20.83■□□□□ 0.93
LBX1P52954 DUX4L27-201ENST00000554796 1261 ntBASIC20.83■□□□□ 0.93
LBX1P52954 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC20.83■□□□□ 0.93
LBX1P52954 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LBX1P52954 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
LBX1P52954 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC20.83■□□□□ 0.93
LBX1P52954 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LBX1P52954 AC125634.1-201ENST00000438758 1403 ntBASIC20.83■□□□□ 0.93
LBX1P52954 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
LBX1P52954 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
LBX1P52954 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
LBX1P52954 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC20.83■□□□□ 0.92
LBX1P52954 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
LBX1P52954 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
LBX1P52954 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LBX1P52954 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
LBX1P52954 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.82■□□□□ 0.92
LBX1P52954 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LBX1P52954 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.82■□□□□ 0.92
LBX1P52954 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LBX1P52954 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC20.82■□□□□ 0.92
LBX1P52954 MIR661-201ENST00000384842 89 ntBASIC20.82■□□□□ 0.92
LBX1P52954 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC20.82■□□□□ 0.92
LBX1P52954 TSPY16P-201ENST00000449843 468 ntBASIC20.82■□□□□ 0.92
LBX1P52954 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LBX1P52954 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC20.82■□□□□ 0.92
LBX1P52954 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC20.82■□□□□ 0.92
LBX1P52954 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC20.82■□□□□ 0.92
LBX1P52954 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LBX1P52954 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC20.82■□□□□ 0.92
LBX1P52954 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC20.82■□□□□ 0.92
LBX1P52954 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LBX1P52954 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LBX1P52954 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LBX1P52954 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.82■□□□□ 0.92
LBX1P52954 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LBX1P52954 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms