Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.96■□□□□ 0.47
PDX1P52945 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
PDX1P52945 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDX1P52945 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDX1P52945 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDX1P52945 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
PDX1P52945 MIR662-201ENST00000384847 95 ntBASIC17.96■□□□□ 0.47
PDX1P52945 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
PDX1P52945 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.96■□□□□ 0.47
PDX1P52945 CHCHD2P8-201ENST00000429873 447 ntBASIC17.96■□□□□ 0.47
PDX1P52945 FDX1P1-201ENST00000449115 551 ntBASIC17.96■□□□□ 0.47
PDX1P52945 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.96■□□□□ 0.47
PDX1P52945 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.96■□□□□ 0.47
PDX1P52945 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.96■□□□□ 0.47
PDX1P52945 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.96■□□□□ 0.47
PDX1P52945 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.96■□□□□ 0.47
PDX1P52945 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PDX1P52945 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PDX1P52945 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDX1P52945 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.96■□□□□ 0.47
PDX1P52945 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
PDX1P52945 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDX1P52945 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDX1P52945 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PDX1P52945 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
PDX1P52945 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDX1P52945 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
PDX1P52945 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
PDX1P52945 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
PDX1P52945 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PDX1P52945 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.95■□□□□ 0.46
PDX1P52945 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
PDX1P52945 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDX1P52945 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDX1P52945 AL845331.1-201ENST00000424978 1190 ntBASIC17.95■□□□□ 0.46
PDX1P52945 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PDX1P52945 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
PDX1P52945 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.95■□□□□ 0.46
PDX1P52945 RNF126P1-202ENST00000569893 925 ntBASIC17.95■□□□□ 0.46
PDX1P52945 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PDX1P52945 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.95■□□□□ 0.46
PDX1P52945 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
PDX1P52945 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
PDX1P52945 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDX1P52945 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.95■□□□□ 0.46
PDX1P52945 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDX1P52945 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDX1P52945 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDX1P52945 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDX1P52945 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDX1P52945 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.95■□□□□ 0.46
PDX1P52945 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDX1P52945 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDX1P52945 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.95■□□□□ 0.46
PDX1P52945 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.95■□□□□ 0.46
PDX1P52945 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDX1P52945 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PDX1P52945 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDX1P52945 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDX1P52945 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PDX1P52945 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDX1P52945 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDX1P52945 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.94■□□□□ 0.46
PDX1P52945 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDX1P52945 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDX1P52945 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.94■□□□□ 0.46
PDX1P52945 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
PDX1P52945 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.94■□□□□ 0.46
PDX1P52945 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDX1P52945 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PDX1P52945 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.94■□□□□ 0.46
PDX1P52945 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDX1P52945 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.94■□□□□ 0.46
PDX1P52945 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.94■□□□□ 0.46
PDX1P52945 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.94■□□□□ 0.46
PDX1P52945 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.94■□□□□ 0.46
PDX1P52945 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
PDX1P52945 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.94■□□□□ 0.46
PDX1P52945 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PDX1P52945 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.94■□□□□ 0.46
PDX1P52945 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
PDX1P52945 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.94■□□□□ 0.46
PDX1P52945 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PDX1P52945 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.94■□□□□ 0.46
PDX1P52945 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PDX1P52945 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDX1P52945 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDX1P52945 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
PDX1P52945 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
PDX1P52945 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDX1P52945 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
PDX1P52945 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDX1P52945 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDX1P52945 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDX1P52945 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDX1P52945 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDX1P52945 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDX1P52945 TSPY22P-201ENST00000427496 604 ntBASIC17.93■□□□□ 0.46
PDX1P52945 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.93■□□□□ 0.46
PDX1P52945 TPSP2-201ENST00000561760 610 ntBASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms