Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
CLCNKAP51800 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
CLCNKAP51800 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CLCNKAP51800 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
CLCNKAP51800 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CLCNKAP51800 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.14■□□□□ 0.5
CLCNKAP51800 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLCNKAP51800 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLCNKAP51800 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLCNKAP51800 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLCNKAP51800 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLCNKAP51800 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLCNKAP51800 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.14■□□□□ 0.49
CLCNKAP51800 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLCNKAP51800 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.14■□□□□ 0.49
CLCNKAP51800 AC116407.4-201ENST00000623319 1061 ntBASIC18.14■□□□□ 0.49
CLCNKAP51800 AL358472.4-201ENST00000633140 710 ntBASIC18.14■□□□□ 0.49
CLCNKAP51800 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CLCNKAP51800 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.14■□□□□ 0.49
CLCNKAP51800 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CLCNKAP51800 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.14■□□□□ 0.49
CLCNKAP51800 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLCNKAP51800 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLCNKAP51800 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLCNKAP51800 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLCNKAP51800 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLCNKAP51800 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLCNKAP51800 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.13■□□□□ 0.49
CLCNKAP51800 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CLCNKAP51800 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLCNKAP51800 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.13■□□□□ 0.49
CLCNKAP51800 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLCNKAP51800 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.13■□□□□ 0.49
CLCNKAP51800 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLCNKAP51800 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLCNKAP51800 PCED1CP-201ENST00000419887 785 ntBASIC18.13■□□□□ 0.49
CLCNKAP51800 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.13■□□□□ 0.49
CLCNKAP51800 SPDYE13P-201ENST00000445314 798 ntBASIC18.13■□□□□ 0.49
CLCNKAP51800 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.13■□□□□ 0.49
CLCNKAP51800 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
CLCNKAP51800 AC079602.3-201ENST00000623931 403 ntBASIC18.13■□□□□ 0.49
CLCNKAP51800 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CLCNKAP51800 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
CLCNKAP51800 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.13■□□□□ 0.49
CLCNKAP51800 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLCNKAP51800 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLCNKAP51800 AC005332.1-201ENST00000577698 1310 ntBASIC18.13■□□□□ 0.49
CLCNKAP51800 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLCNKAP51800 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLCNKAP51800 KRT8P50-201ENST00000562022 1438 ntBASIC18.13■□□□□ 0.49
CLCNKAP51800 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
CLCNKAP51800 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLCNKAP51800 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLCNKAP51800 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLCNKAP51800 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.13■□□□□ 0.49
CLCNKAP51800 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLCNKAP51800 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLCNKAP51800 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
CLCNKAP51800 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLCNKAP51800 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.12■□□□□ 0.49
CLCNKAP51800 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
CLCNKAP51800 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.12■□□□□ 0.49
CLCNKAP51800 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLCNKAP51800 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.12■□□□□ 0.49
CLCNKAP51800 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLCNKAP51800 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLCNKAP51800 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLCNKAP51800 AC018445.3-201ENST00000624177 1945 ntBASIC18.12■□□□□ 0.49
CLCNKAP51800 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
CLCNKAP51800 AC092597.1-201ENST00000487352 616 ntBASIC18.12■□□□□ 0.49
CLCNKAP51800 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.12■□□□□ 0.49
CLCNKAP51800 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.12■□□□□ 0.49
CLCNKAP51800 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.12■□□□□ 0.49
CLCNKAP51800 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.12■□□□□ 0.49
CLCNKAP51800 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLCNKAP51800 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.12■□□□□ 0.49
CLCNKAP51800 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLCNKAP51800 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.12■□□□□ 0.49
CLCNKAP51800 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLCNKAP51800 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.12■□□□□ 0.49
CLCNKAP51800 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLCNKAP51800 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CLCNKAP51800 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLCNKAP51800 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.12■□□□□ 0.49
CLCNKAP51800 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLCNKAP51800 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CLCNKAP51800 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CLCNKAP51800 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CLCNKAP51800 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLCNKAP51800 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.11■□□□□ 0.49
CLCNKAP51800 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.11■□□□□ 0.49
CLCNKAP51800 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLCNKAP51800 PVRIG2P-201ENST00000435460 978 ntBASIC18.11■□□□□ 0.49
CLCNKAP51800 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLCNKAP51800 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.11■□□□□ 0.49
CLCNKAP51800 VENTXP5-201ENST00000523979 775 ntBASIC18.11■□□□□ 0.49
CLCNKAP51800 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.11■□□□□ 0.49
CLCNKAP51800 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
CLCNKAP51800 AL136038.4-201ENST00000603606 1261 ntBASIC18.11■□□□□ 0.49
CLCNKAP51800 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms