Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CPT1AP50416 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.5■□□□□ 0.87
CPT1AP50416 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CPT1AP50416 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.5■□□□□ 0.87
CPT1AP50416 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.5■□□□□ 0.87
CPT1AP50416 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CPT1AP50416 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CPT1AP50416 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CPT1AP50416 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CPT1AP50416 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CPT1AP50416 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPT1AP50416 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
CPT1AP50416 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPT1AP50416 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC20.49■□□□□ 0.87
CPT1AP50416 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPT1AP50416 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC20.49■□□□□ 0.87
CPT1AP50416 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC20.49■□□□□ 0.87
CPT1AP50416 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPT1AP50416 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC20.49■□□□□ 0.87
CPT1AP50416 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
CPT1AP50416 AC064862.7-201ENST00000604520 867 ntBASIC20.49■□□□□ 0.87
CPT1AP50416 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPT1AP50416 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC20.49■□□□□ 0.87
CPT1AP50416 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CPT1AP50416 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPT1AP50416 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CPT1AP50416 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPT1AP50416 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.49■□□□□ 0.87
CPT1AP50416 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.49■□□□□ 0.87
CPT1AP50416 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CPT1AP50416 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPT1AP50416 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.48■□□□□ 0.87
CPT1AP50416 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPT1AP50416 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPT1AP50416 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
CPT1AP50416 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.48■□□□□ 0.87
CPT1AP50416 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPT1AP50416 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPT1AP50416 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPT1AP50416 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPT1AP50416 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CPT1AP50416 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC20.48■□□□□ 0.87
CPT1AP50416 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC20.48■□□□□ 0.87
CPT1AP50416 AC113404.2-201ENST00000507884 177 ntBASIC20.48■□□□□ 0.87
CPT1AP50416 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC20.48■□□□□ 0.87
CPT1AP50416 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC20.48■□□□□ 0.87
CPT1AP50416 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CPT1AP50416 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC20.48■□□□□ 0.87
CPT1AP50416 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC20.48■□□□□ 0.87
CPT1AP50416 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CPT1AP50416 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CPT1AP50416 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
CPT1AP50416 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPT1AP50416 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.48■□□□□ 0.87
CPT1AP50416 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC20.48■□□□□ 0.87
CPT1AP50416 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.48■□□□□ 0.87
CPT1AP50416 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CPT1AP50416 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPT1AP50416 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CPT1AP50416 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CPT1AP50416 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPT1AP50416 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPT1AP50416 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.48■□□□□ 0.87
CPT1AP50416 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CPT1AP50416 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CPT1AP50416 AC093484.2-201ENST00000580996 2166 ntBASIC20.47■□□□□ 0.87
CPT1AP50416 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CPT1AP50416 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CPT1AP50416 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC20.47■□□□□ 0.87
CPT1AP50416 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20.47■□□□□ 0.87
CPT1AP50416 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.47■□□□□ 0.87
CPT1AP50416 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CPT1AP50416 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CPT1AP50416 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CPT1AP50416 HLA-A-201ENST00000376802 1334 ntBASIC20.47■□□□□ 0.87
CPT1AP50416 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.47■□□□□ 0.87
CPT1AP50416 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20.47■□□□□ 0.87
CPT1AP50416 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CPT1AP50416 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.46■□□□□ 0.87
CPT1AP50416 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
CPT1AP50416 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CPT1AP50416 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.46■□□□□ 0.87
CPT1AP50416 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CPT1AP50416 AC009102.3-201ENST00000623118 1491 ntBASIC20.46■□□□□ 0.87
CPT1AP50416 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CPT1AP50416 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CPT1AP50416 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CPT1AP50416 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CPT1AP50416 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
CPT1AP50416 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC20.46■□□□□ 0.87
CPT1AP50416 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC20.46■□□□□ 0.87
CPT1AP50416 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CPT1AP50416 AF238378.1-201ENST00000526806 358 ntBASIC20.46■□□□□ 0.87
CPT1AP50416 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC20.46■□□□□ 0.87
CPT1AP50416 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CPT1AP50416 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CPT1AP50416 AC083906.6-201ENST00000641366 219 ntBASIC20.46■□□□□ 0.87
CPT1AP50416 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CPT1AP50416 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CPT1AP50416 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms