Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC16.79■□□□□ 0.28
CENPAP49450 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CENPAP49450 NIFKP9-201ENST00000419265 221 ntBASIC16.79■□□□□ 0.28
CENPAP49450 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.79■□□□□ 0.28
CENPAP49450 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CENPAP49450 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CENPAP49450 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CENPAP49450 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC16.79■□□□□ 0.28
CENPAP49450 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC16.79■□□□□ 0.28
CENPAP49450 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.79■□□□□ 0.28
CENPAP49450 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CENPAP49450 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CENPAP49450 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.79■□□□□ 0.28
CENPAP49450 AC018470.1-201ENST00000624790 3129 ntBASIC16.79■□□□□ 0.28
CENPAP49450 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CENPAP49450 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CENPAP49450 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CENPAP49450 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CENPAP49450 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CENPAP49450 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CENPAP49450 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CENPAP49450 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CENPAP49450 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CENPAP49450 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.78■□□□□ 0.28
CENPAP49450 AC135050.7-201ENST00000624508 2218 ntBASIC16.78■□□□□ 0.28
CENPAP49450 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CENPAP49450 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CENPAP49450 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.78■□□□□ 0.28
CENPAP49450 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CENPAP49450 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CENPAP49450 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CENPAP49450 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CENPAP49450 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CENPAP49450 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CENPAP49450 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CENPAP49450 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CENPAP49450 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.78■□□□□ 0.28
CENPAP49450 AC073592.3-201ENST00000625118 1834 ntBASIC16.78■□□□□ 0.28
CENPAP49450 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
CENPAP49450 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.78■□□□□ 0.28
CENPAP49450 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CENPAP49450 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CENPAP49450 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CENPAP49450 RPPH1-201ENST00000516869 333 ntBASIC16.78■□□□□ 0.28
CENPAP49450 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC16.78■□□□□ 0.28
CENPAP49450 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CENPAP49450 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.78■□□□□ 0.28
CENPAP49450 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.78■□□□□ 0.28
CENPAP49450 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CENPAP49450 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CENPAP49450 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.78■□□□□ 0.28
CENPAP49450 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CENPAP49450 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.78■□□□□ 0.28
CENPAP49450 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CENPAP49450 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CENPAP49450 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.78■□□□□ 0.28
CENPAP49450 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CENPAP49450 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CENPAP49450 HEIH-201ENST00000623091 1652 ntBASIC16.78■□□□□ 0.28
CENPAP49450 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CENPAP49450 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CENPAP49450 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CENPAP49450 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CENPAP49450 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CENPAP49450 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CENPAP49450 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.78■□□□□ 0.28
CENPAP49450 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CENPAP49450 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CENPAP49450 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.77■□□□□ 0.28
CENPAP49450 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CENPAP49450 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CENPAP49450 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CENPAP49450 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.77■□□□□ 0.28
CENPAP49450 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
CENPAP49450 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CENPAP49450 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.77■□□□□ 0.28
CENPAP49450 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CENPAP49450 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
CENPAP49450 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CENPAP49450 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CENPAP49450 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CENPAP49450 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.77■□□□□ 0.28
CENPAP49450 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CENPAP49450 KSR1P1-201ENST00000446298 240 ntBASIC16.77■□□□□ 0.28
CENPAP49450 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC16.77■□□□□ 0.28
CENPAP49450 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CENPAP49450 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.77■□□□□ 0.28
CENPAP49450 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CENPAP49450 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC16.77■□□□□ 0.28
CENPAP49450 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
CENPAP49450 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.77■□□□□ 0.28
CENPAP49450 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CENPAP49450 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.77■□□□□ 0.27
CENPAP49450 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
CENPAP49450 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CENPAP49450 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CENPAP49450 KRT8P11-201ENST00000409686 1436 ntBASIC16.77■□□□□ 0.27
CENPAP49450 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.77■□□□□ 0.27
CENPAP49450 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CENPAP49450 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms