Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CSNK1DP48730 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CSNK1DP48730 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CSNK1DP48730 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CSNK1DP48730 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CSNK1DP48730 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.53■□□□□ 0.56
CSNK1DP48730 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CSNK1DP48730 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CSNK1DP48730 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.53■□□□□ 0.56
CSNK1DP48730 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.53■□□□□ 0.56
CSNK1DP48730 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.53■□□□□ 0.56
CSNK1DP48730 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.53■□□□□ 0.56
CSNK1DP48730 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CSNK1DP48730 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CSNK1DP48730 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.53■□□□□ 0.56
CSNK1DP48730 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CSNK1DP48730 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
CSNK1DP48730 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
CSNK1DP48730 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CSNK1DP48730 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CSNK1DP48730 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CSNK1DP48730 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.53■□□□□ 0.56
CSNK1DP48730 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CSNK1DP48730 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CSNK1DP48730 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.52■□□□□ 0.56
CSNK1DP48730 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CSNK1DP48730 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CSNK1DP48730 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.52■□□□□ 0.56
CSNK1DP48730 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.52■□□□□ 0.56
CSNK1DP48730 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CSNK1DP48730 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.52■□□□□ 0.56
CSNK1DP48730 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
CSNK1DP48730 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.52■□□□□ 0.56
CSNK1DP48730 VENTXP5-201ENST00000523979 775 ntBASIC18.52■□□□□ 0.56
CSNK1DP48730 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.52■□□□□ 0.56
CSNK1DP48730 AC116407.4-201ENST00000623319 1061 ntBASIC18.52■□□□□ 0.56
CSNK1DP48730 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CSNK1DP48730 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CSNK1DP48730 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CSNK1DP48730 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.52■□□□□ 0.56
CSNK1DP48730 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
CSNK1DP48730 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CSNK1DP48730 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CSNK1DP48730 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.52■□□□□ 0.55
CSNK1DP48730 WIZP1-201ENST00000531444 2299 ntBASIC18.52■□□□□ 0.55
CSNK1DP48730 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CSNK1DP48730 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.52■□□□□ 0.55
CSNK1DP48730 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.52■□□□□ 0.55
CSNK1DP48730 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
CSNK1DP48730 AC005332.1-201ENST00000577698 1310 ntBASIC18.51■□□□□ 0.55
CSNK1DP48730 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CSNK1DP48730 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CSNK1DP48730 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CSNK1DP48730 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CSNK1DP48730 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CSNK1DP48730 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CSNK1DP48730 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CSNK1DP48730 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CSNK1DP48730 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.51■□□□□ 0.55
CSNK1DP48730 KRT18P48-201ENST00000434763 852 ntBASIC18.51■□□□□ 0.55
CSNK1DP48730 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CSNK1DP48730 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.51■□□□□ 0.55
CSNK1DP48730 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.51■□□□□ 0.55
CSNK1DP48730 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.51■□□□□ 0.55
CSNK1DP48730 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.51■□□□□ 0.55
CSNK1DP48730 AL024508.2-201ENST00000607749 1894 ntBASIC18.51■□□□□ 0.55
CSNK1DP48730 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CSNK1DP48730 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.51■□□□□ 0.55
CSNK1DP48730 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CSNK1DP48730 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CSNK1DP48730 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CSNK1DP48730 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
CSNK1DP48730 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CSNK1DP48730 AL162741.1-201ENST00000565563 1558 ntBASIC18.51■□□□□ 0.55
CSNK1DP48730 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CSNK1DP48730 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.5■□□□□ 0.55
CSNK1DP48730 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CSNK1DP48730 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CSNK1DP48730 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CSNK1DP48730 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.5■□□□□ 0.55
CSNK1DP48730 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.5■□□□□ 0.55
CSNK1DP48730 PCED1CP-201ENST00000419887 785 ntBASIC18.5■□□□□ 0.55
CSNK1DP48730 AL645929.1-201ENST00000420084 975 ntBASIC18.5■□□□□ 0.55
CSNK1DP48730 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.5■□□□□ 0.55
CSNK1DP48730 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.5■□□□□ 0.55
CSNK1DP48730 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.5■□□□□ 0.55
CSNK1DP48730 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.5■□□□□ 0.55
CSNK1DP48730 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CSNK1DP48730 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.5■□□□□ 0.55
CSNK1DP48730 AC091076.1-201ENST00000610741 619 ntBASIC18.5■□□□□ 0.55
CSNK1DP48730 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.5■□□□□ 0.55
CSNK1DP48730 AP000550.4-202ENST00000639755 178 ntBASIC18.5■□□□□ 0.55
CSNK1DP48730 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CSNK1DP48730 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CSNK1DP48730 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.5■□□□□ 0.55
CSNK1DP48730 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CSNK1DP48730 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CSNK1DP48730 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CSNK1DP48730 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CSNK1DP48730 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms