Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
USP8P40818 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
USP8P40818 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP8P40818 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP8P40818 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP8P40818 PKD1P1-201ENST00000458669 6805 ntBASIC20.18■□□□□ 0.82
USP8P40818 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
USP8P40818 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
USP8P40818 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.17■□□□□ 0.82
USP8P40818 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
USP8P40818 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
USP8P40818 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.17■□□□□ 0.82
USP8P40818 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC20.17■□□□□ 0.82
USP8P40818 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
USP8P40818 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.17■□□□□ 0.82
USP8P40818 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.17■□□□□ 0.82
USP8P40818 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.17■□□□□ 0.82
USP8P40818 AP000997.3-201ENST00000623333 2250 ntBASIC20.17■□□□□ 0.82
USP8P40818 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
USP8P40818 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
USP8P40818 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.17■□□□□ 0.82
USP8P40818 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.17■□□□□ 0.82
USP8P40818 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.17■□□□□ 0.82
USP8P40818 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
USP8P40818 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.17■□□□□ 0.82
USP8P40818 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
USP8P40818 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
USP8P40818 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.17■□□□□ 0.82
USP8P40818 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.17■□□□□ 0.82
USP8P40818 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
USP8P40818 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC20.17■□□□□ 0.82
USP8P40818 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
USP8P40818 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
USP8P40818 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
USP8P40818 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.16■□□□□ 0.82
USP8P40818 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
USP8P40818 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
USP8P40818 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC20.16■□□□□ 0.82
USP8P40818 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.16■□□□□ 0.82
USP8P40818 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
USP8P40818 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
USP8P40818 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
USP8P40818 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
USP8P40818 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.16■□□□□ 0.82
USP8P40818 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.16■□□□□ 0.82
USP8P40818 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.16■□□□□ 0.82
USP8P40818 DGCR10-201ENST00000609839 495 ntBASIC20.16■□□□□ 0.82
USP8P40818 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
USP8P40818 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
USP8P40818 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
USP8P40818 PCDHB18P-201ENST00000524813 2368 ntBASIC20.16■□□□□ 0.82
USP8P40818 AC009113.1-201ENST00000570267 2443 ntBASIC20.16■□□□□ 0.82
USP8P40818 KRT8P32-201ENST00000512863 1461 ntBASIC20.16■□□□□ 0.82
USP8P40818 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.16■□□□□ 0.82
USP8P40818 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
USP8P40818 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
USP8P40818 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.16■□□□□ 0.82
USP8P40818 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
USP8P40818 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC20.16■□□□□ 0.82
USP8P40818 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
USP8P40818 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
USP8P40818 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
USP8P40818 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
USP8P40818 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
USP8P40818 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP8P40818 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP8P40818 HR-201ENST00000312841 5351 ntTSL 5 BASIC20.15■□□□□ 0.82
USP8P40818 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC20.15■□□□□ 0.82
USP8P40818 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
USP8P40818 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC20.15■□□□□ 0.82
USP8P40818 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
USP8P40818 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP8P40818 SNORA78-201ENST00000459373 127 ntBASIC20.15■□□□□ 0.82
USP8P40818 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.15■□□□□ 0.82
USP8P40818 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP8P40818 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
USP8P40818 AC068587.9-201ENST00000641814 219 ntBASIC20.15■□□□□ 0.82
USP8P40818 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP8P40818 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP8P40818 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP8P40818 RCC2P3-201ENST00000418112 1537 ntBASIC20.15■□□□□ 0.82
USP8P40818 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.15■□□□□ 0.82
USP8P40818 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.15■□□□□ 0.82
USP8P40818 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.15■□□□□ 0.82
USP8P40818 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
USP8P40818 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP8P40818 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
USP8P40818 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP8P40818 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP8P40818 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP8P40818 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20.15■□□□□ 0.82
USP8P40818 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP8P40818 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
USP8P40818 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
USP8P40818 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.82
USP8P40818 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
USP8P40818 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
USP8P40818 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.14■□□□□ 0.82
USP8P40818 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
USP8P40818 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms