Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCK1P35558 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
PCK1P35558 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCK1P35558 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCK1P35558 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
PCK1P35558 SNORA78-201ENST00000459373 127 ntBASIC19.5■□□□□ 0.71
PCK1P35558 KRT18P41-201ENST00000518924 1277 ntBASIC19.5■□□□□ 0.71
PCK1P35558 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
PCK1P35558 FITM1-202ENST00000559294 800 ntBASIC19.5■□□□□ 0.71
PCK1P35558 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCK1P35558 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCK1P35558 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCK1P35558 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.5■□□□□ 0.71
PCK1P35558 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCK1P35558 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCK1P35558 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.5■□□□□ 0.71
PCK1P35558 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
PCK1P35558 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCK1P35558 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCK1P35558 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
PCK1P35558 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCK1P35558 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCK1P35558 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.5■□□□□ 0.71
PCK1P35558 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCK1P35558 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCK1P35558 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCK1P35558 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCK1P35558 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCK1P35558 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.49■□□□□ 0.71
PCK1P35558 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
PCK1P35558 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.49■□□□□ 0.71
PCK1P35558 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCK1P35558 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCK1P35558 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCK1P35558 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCK1P35558 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCK1P35558 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.49■□□□□ 0.71
PCK1P35558 AL499627.1-201ENST00000569373 2188 ntBASIC19.49■□□□□ 0.71
PCK1P35558 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.49■□□□□ 0.71
PCK1P35558 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCK1P35558 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCK1P35558 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCK1P35558 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCK1P35558 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.49■□□□□ 0.71
PCK1P35558 SLC25A1P2-201ENST00000430693 912 ntBASIC19.49■□□□□ 0.71
PCK1P35558 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.49■□□□□ 0.71
PCK1P35558 MCCD1P1-208ENST00000445732 328 ntBASIC19.49■□□□□ 0.71
PCK1P35558 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
PCK1P35558 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.49■□□□□ 0.71
PCK1P35558 AL023803.3-201ENST00000615559 522 ntBASIC19.49■□□□□ 0.71
PCK1P35558 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.49■□□□□ 0.71
PCK1P35558 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCK1P35558 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCK1P35558 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
PCK1P35558 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCK1P35558 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCK1P35558 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCK1P35558 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.49■□□□□ 0.71
PCK1P35558 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCK1P35558 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.49■□□□□ 0.71
PCK1P35558 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.49■□□□□ 0.71
PCK1P35558 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
PCK1P35558 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCK1P35558 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCK1P35558 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCK1P35558 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCK1P35558 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCK1P35558 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCK1P35558 AC126763.1-201ENST00000552015 2118 ntBASIC19.48■□□□□ 0.71
PCK1P35558 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCK1P35558 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
PCK1P35558 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCK1P35558 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.48■□□□□ 0.71
PCK1P35558 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
PCK1P35558 MIR564-202ENST00000385049 94 ntBASIC19.48■□□□□ 0.71
PCK1P35558 MIR4497-201ENST00000583208 89 ntBASIC19.48■□□□□ 0.71
PCK1P35558 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.48■□□□□ 0.71
PCK1P35558 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.48■□□□□ 0.71
PCK1P35558 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.48■□□□□ 0.71
PCK1P35558 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCK1P35558 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCK1P35558 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCK1P35558 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCK1P35558 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.48■□□□□ 0.71
PCK1P35558 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCK1P35558 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.48■□□□□ 0.71
PCK1P35558 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
PCK1P35558 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCK1P35558 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCK1P35558 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCK1P35558 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCK1P35558 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.47■□□□□ 0.71
PCK1P35558 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
PCK1P35558 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCK1P35558 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.47■□□□□ 0.71
PCK1P35558 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC19.47■□□□□ 0.71
PCK1P35558 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.47■□□□□ 0.71
PCK1P35558 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCK1P35558 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCK1P35558 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms