Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RPA3P35244 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RPA3P35244 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.73■□□□□ 0.59
RPA3P35244 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.73■□□□□ 0.59
RPA3P35244 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.73■□□□□ 0.59
RPA3P35244 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.73■□□□□ 0.59
RPA3P35244 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.73■□□□□ 0.59
RPA3P35244 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
RPA3P35244 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.73■□□□□ 0.59
RPA3P35244 AL353708.3-201ENST00000610272 989 ntBASIC18.73■□□□□ 0.59
RPA3P35244 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.73■□□□□ 0.59
RPA3P35244 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.73■□□□□ 0.59
RPA3P35244 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RPA3P35244 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
RPA3P35244 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RPA3P35244 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RPA3P35244 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RPA3P35244 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
RPA3P35244 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.73■□□□□ 0.59
RPA3P35244 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPA3P35244 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPA3P35244 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.72■□□□□ 0.59
RPA3P35244 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.72■□□□□ 0.59
RPA3P35244 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPA3P35244 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.72■□□□□ 0.59
RPA3P35244 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.72■□□□□ 0.59
RPA3P35244 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.72■□□□□ 0.59
RPA3P35244 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.72■□□□□ 0.59
RPA3P35244 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RPA3P35244 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.72■□□□□ 0.59
RPA3P35244 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.72■□□□□ 0.59
RPA3P35244 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.72■□□□□ 0.59
RPA3P35244 AP001412.1-201ENST00000608405 714 ntBASIC18.72■□□□□ 0.59
RPA3P35244 HLA-A-209ENST00000638375 975 ntBASIC18.72■□□□□ 0.59
RPA3P35244 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPA3P35244 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPA3P35244 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPA3P35244 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
RPA3P35244 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RPA3P35244 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
RPA3P35244 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPA3P35244 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.72■□□□□ 0.59
RPA3P35244 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RPA3P35244 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
RPA3P35244 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.71■□□□□ 0.59
RPA3P35244 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RPA3P35244 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPA3P35244 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RPA3P35244 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPA3P35244 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RPA3P35244 GNAS-203ENST00000306120 1878 ntBASIC18.71■□□□□ 0.59
RPA3P35244 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RPA3P35244 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.71■□□□□ 0.59
RPA3P35244 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RPA3P35244 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.71■□□□□ 0.59
RPA3P35244 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RPA3P35244 MIR718-201ENST00000390190 70 ntBASIC18.71■□□□□ 0.59
RPA3P35244 RPS2P55-201ENST00000397318 883 ntBASIC18.71■□□□□ 0.59
RPA3P35244 KSR1P1-201ENST00000446298 240 ntBASIC18.71■□□□□ 0.59
RPA3P35244 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.71■□□□□ 0.59
RPA3P35244 AC107956.1-201ENST00000494359 873 ntBASIC18.71■□□□□ 0.59
RPA3P35244 AC008550.1-201ENST00000511500 884 ntBASIC18.71■□□□□ 0.59
RPA3P35244 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RPA3P35244 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.71■□□□□ 0.59
RPA3P35244 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.71■□□□□ 0.59
RPA3P35244 AL160286.2-201ENST00000567150 934 ntBASIC18.71■□□□□ 0.59
RPA3P35244 AC073195.1-201ENST00000607241 877 ntBASIC18.71■□□□□ 0.59
RPA3P35244 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.71■□□□□ 0.59
RPA3P35244 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPA3P35244 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPA3P35244 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.71■□□□□ 0.59
RPA3P35244 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPA3P35244 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
RPA3P35244 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPA3P35244 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPA3P35244 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.71■□□□□ 0.59
RPA3P35244 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPA3P35244 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.71■□□□□ 0.59
RPA3P35244 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPA3P35244 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.71■□□□□ 0.59
RPA3P35244 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.58
RPA3P35244 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPA3P35244 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPA3P35244 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPA3P35244 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPA3P35244 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
RPA3P35244 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPA3P35244 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPA3P35244 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.7■□□□□ 0.58
RPA3P35244 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.7■□□□□ 0.58
RPA3P35244 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPA3P35244 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPA3P35244 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.7■□□□□ 0.58
RPA3P35244 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RPA3P35244 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
RPA3P35244 AC012618.2-201ENST00000428058 849 ntBASIC18.7■□□□□ 0.58
RPA3P35244 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
RPA3P35244 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.7■□□□□ 0.58
RPA3P35244 RPS2P4-201ENST00000476944 856 ntBASIC18.7■□□□□ 0.58
RPA3P35244 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms