Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CKS2P33552 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CKS2P33552 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CKS2P33552 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CKS2P33552 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC13.63□□□□□ -0.23
CKS2P33552 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC13.63□□□□□ -0.23
CKS2P33552 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CKS2P33552 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CKS2P33552 AC124067.4-201ENST00000519691 2379 ntBASIC13.63□□□□□ -0.23
CKS2P33552 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CKS2P33552 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
CKS2P33552 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CKS2P33552 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC13.63□□□□□ -0.23
CKS2P33552 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC13.63□□□□□ -0.23
CKS2P33552 RAB43-208ENST00000615093 783 ntTSL 5 BASIC13.63□□□□□ -0.23
CKS2P33552 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CKS2P33552 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CKS2P33552 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC13.63□□□□□ -0.23
CKS2P33552 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC13.63□□□□□ -0.23
CKS2P33552 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CKS2P33552 AC084018.2-201ENST00000613093 2607 ntBASIC13.63□□□□□ -0.23
CKS2P33552 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
CKS2P33552 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CKS2P33552 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CKS2P33552 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CKS2P33552 AP006587.1-201ENST00000534129 1502 ntBASIC13.63□□□□□ -0.23
CKS2P33552 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CKS2P33552 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CKS2P33552 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC13.63□□□□□ -0.23
CKS2P33552 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC13.63□□□□□ -0.23
CKS2P33552 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CKS2P33552 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CKS2P33552 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CKS2P33552 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CKS2P33552 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CKS2P33552 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC13.63□□□□□ -0.23
CKS2P33552 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CKS2P33552 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CKS2P33552 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CKS2P33552 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CKS2P33552 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CKS2P33552 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CKS2P33552 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CKS2P33552 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CKS2P33552 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CKS2P33552 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CKS2P33552 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
CKS2P33552 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CKS2P33552 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CKS2P33552 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CKS2P33552 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CKS2P33552 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
CKS2P33552 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC13.62□□□□□ -0.23
CKS2P33552 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CKS2P33552 FLYWCH1P1-201ENST00000460917 1874 ntBASIC13.62□□□□□ -0.23
CKS2P33552 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CKS2P33552 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CKS2P33552 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CKS2P33552 YBX1P10-201ENST00000444752 975 ntBASIC13.62□□□□□ -0.23
CKS2P33552 SERP1-205ENST00000487153 657 ntTSL 4 BASIC13.62□□□□□ -0.23
CKS2P33552 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC13.62□□□□□ -0.23
CKS2P33552 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC13.62□□□□□ -0.23
CKS2P33552 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CKS2P33552 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CKS2P33552 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CKS2P33552 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC13.62□□□□□ -0.23
CKS2P33552 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CKS2P33552 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC13.62□□□□□ -0.23
CKS2P33552 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC13.62□□□□□ -0.23
CKS2P33552 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CKS2P33552 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC13.62□□□□□ -0.23
CKS2P33552 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CKS2P33552 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CKS2P33552 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CKS2P33552 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CKS2P33552 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC13.62□□□□□ -0.23
CKS2P33552 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
CKS2P33552 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
CKS2P33552 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CKS2P33552 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CKS2P33552 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CKS2P33552 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CKS2P33552 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CKS2P33552 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CKS2P33552 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CKS2P33552 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CKS2P33552 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CKS2P33552 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
CKS2P33552 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CKS2P33552 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CKS2P33552 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CKS2P33552 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CKS2P33552 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CKS2P33552 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CKS2P33552 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CKS2P33552 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CKS2P33552 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CKS2P33552 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC13.61□□□□□ -0.23
CKS2P33552 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CKS2P33552 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms