Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
MMP11P24347 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.58■□□□□ 0.4
MMP11P24347 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
MMP11P24347 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.58■□□□□ 0.4
MMP11P24347 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.58■□□□□ 0.4
MMP11P24347 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.58■□□□□ 0.4
MMP11P24347 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
MMP11P24347 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.58■□□□□ 0.4
MMP11P24347 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
MMP11P24347 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
MMP11P24347 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
MMP11P24347 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
MMP11P24347 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
MMP11P24347 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
MMP11P24347 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
MMP11P24347 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
MMP11P24347 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
MMP11P24347 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.58■□□□□ 0.4
MMP11P24347 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
MMP11P24347 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.58■□□□□ 0.4
MMP11P24347 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
MMP11P24347 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
MMP11P24347 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
MMP11P24347 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MMP11P24347 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
MMP11P24347 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MMP11P24347 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
MMP11P24347 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
MMP11P24347 IER3-202ENST00000376377 1350 ntBASIC17.57■□□□□ 0.4
MMP11P24347 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.57■□□□□ 0.4
MMP11P24347 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
MMP11P24347 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.57■□□□□ 0.4
MMP11P24347 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
MMP11P24347 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MMP11P24347 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.57■□□□□ 0.4
MMP11P24347 AC034232.1-201ENST00000506026 1064 ntBASIC17.57■□□□□ 0.4
MMP11P24347 AL136038.3-201ENST00000561909 1096 ntBASIC17.57■□□□□ 0.4
MMP11P24347 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
MMP11P24347 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
MMP11P24347 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.57■□□□□ 0.4
MMP11P24347 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
MMP11P24347 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
MMP11P24347 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.57■□□□□ 0.4
MMP11P24347 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
MMP11P24347 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
MMP11P24347 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MMP11P24347 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
MMP11P24347 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
MMP11P24347 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.57■□□□□ 0.4
MMP11P24347 AC093525.10-201ENST00000625130 1569 ntBASIC17.57■□□□□ 0.4
MMP11P24347 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MMP11P24347 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MMP11P24347 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
MMP11P24347 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MMP11P24347 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MMP11P24347 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.56■□□□□ 0.4
MMP11P24347 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
MMP11P24347 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
MMP11P24347 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.56■□□□□ 0.4
MMP11P24347 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.56■□□□□ 0.4
MMP11P24347 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MMP11P24347 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MMP11P24347 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MMP11P24347 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MMP11P24347 AC005332.1-201ENST00000577698 1310 ntBASIC17.56■□□□□ 0.4
MMP11P24347 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
MMP11P24347 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
MMP11P24347 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MMP11P24347 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MMP11P24347 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MMP11P24347 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MMP11P24347 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.56■□□□□ 0.4
MMP11P24347 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MMP11P24347 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MMP11P24347 SPDYE15P-201ENST00000424157 909 ntBASIC17.56■□□□□ 0.4
MMP11P24347 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.56■□□□□ 0.4
MMP11P24347 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.56■□□□□ 0.4
MMP11P24347 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.56■□□□□ 0.4
MMP11P24347 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.56■□□□□ 0.4
MMP11P24347 ZNF444P1-201ENST00000559497 298 ntBASIC17.56■□□□□ 0.4
MMP11P24347 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.56■□□□□ 0.4
MMP11P24347 HYMAI.1-201ENST00000620949 238 ntBASIC17.56■□□□□ 0.4
MMP11P24347 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.56■□□□□ 0.4
MMP11P24347 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.56■□□□□ 0.4
MMP11P24347 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
MMP11P24347 WIZP1-201ENST00000531444 2299 ntBASIC17.56■□□□□ 0.4
MMP11P24347 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
MMP11P24347 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MMP11P24347 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MMP11P24347 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.56■□□□□ 0.4
MMP11P24347 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
MMP11P24347 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MMP11P24347 IRX1P1-201ENST00000438849 1838 ntBASIC17.56■□□□□ 0.4
MMP11P24347 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MMP11P24347 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
MMP11P24347 LINC01311-201ENST00000565162 1445 ntBASIC17.55■□□□□ 0.4
MMP11P24347 FEM1AP3-201ENST00000403722 1741 ntBASIC17.55■□□□□ 0.4
MMP11P24347 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
MMP11P24347 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.55■□□□□ 0.4
MMP11P24347 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms