Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.84■□□□□ 0.45
CAPN3P20807 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CAPN3P20807 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CAPN3P20807 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.84■□□□□ 0.45
CAPN3P20807 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.84■□□□□ 0.45
CAPN3P20807 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.84■□□□□ 0.45
CAPN3P20807 KRT8P45-201ENST00000414328 1447 ntBASIC17.84■□□□□ 0.45
CAPN3P20807 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.84■□□□□ 0.45
CAPN3P20807 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.84■□□□□ 0.45
CAPN3P20807 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CAPN3P20807 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CAPN3P20807 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.84■□□□□ 0.45
CAPN3P20807 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.84■□□□□ 0.45
CAPN3P20807 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.84■□□□□ 0.45
CAPN3P20807 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.84■□□□□ 0.45
CAPN3P20807 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CAPN3P20807 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.84■□□□□ 0.45
CAPN3P20807 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CAPN3P20807 CD177P1-201ENST00000606252 935 ntBASIC17.84■□□□□ 0.45
CAPN3P20807 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CAPN3P20807 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CAPN3P20807 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CAPN3P20807 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CAPN3P20807 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CAPN3P20807 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CAPN3P20807 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.84■□□□□ 0.45
CAPN3P20807 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
CAPN3P20807 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.84■□□□□ 0.45
CAPN3P20807 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CAPN3P20807 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
CAPN3P20807 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CAPN3P20807 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.83■□□□□ 0.45
CAPN3P20807 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CAPN3P20807 AC134043.2-201ENST00000624206 2238 ntBASIC17.83■□□□□ 0.45
CAPN3P20807 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
CAPN3P20807 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
CAPN3P20807 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CAPN3P20807 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.83■□□□□ 0.45
CAPN3P20807 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CAPN3P20807 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CAPN3P20807 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CAPN3P20807 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CAPN3P20807 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CAPN3P20807 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CAPN3P20807 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.83■□□□□ 0.44
CAPN3P20807 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CAPN3P20807 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CAPN3P20807 ARMC10P1-201ENST00000313754 855 ntBASIC17.83■□□□□ 0.44
CAPN3P20807 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CAPN3P20807 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CAPN3P20807 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.83■□□□□ 0.44
CAPN3P20807 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.83■□□□□ 0.44
CAPN3P20807 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.83■□□□□ 0.44
CAPN3P20807 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.83■□□□□ 0.44
CAPN3P20807 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CAPN3P20807 AC133681.1-201ENST00000465482 601 ntBASIC17.83■□□□□ 0.44
CAPN3P20807 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CAPN3P20807 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CAPN3P20807 AC233263.1-201ENST00000578059 224 ntBASIC17.83■□□□□ 0.44
CAPN3P20807 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.83■□□□□ 0.44
CAPN3P20807 AL590326.2-201ENST00000625139 305 ntBASIC17.83■□□□□ 0.44
CAPN3P20807 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CAPN3P20807 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.83■□□□□ 0.44
CAPN3P20807 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CAPN3P20807 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CAPN3P20807 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
CAPN3P20807 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CAPN3P20807 LINC00896-202ENST00000609602 2128 ntBASIC17.83■□□□□ 0.44
CAPN3P20807 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.83■□□□□ 0.44
CAPN3P20807 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CAPN3P20807 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
CAPN3P20807 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CAPN3P20807 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CAPN3P20807 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.82■□□□□ 0.44
CAPN3P20807 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.82■□□□□ 0.44
CAPN3P20807 KRT8P3-201ENST00000519669 1449 ntBASIC17.82■□□□□ 0.44
CAPN3P20807 AC112777.1-201ENST00000540175 1423 ntBASIC17.82■□□□□ 0.44
CAPN3P20807 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CAPN3P20807 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CAPN3P20807 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.82■□□□□ 0.44
CAPN3P20807 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
CAPN3P20807 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.82■□□□□ 0.44
CAPN3P20807 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
CAPN3P20807 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CAPN3P20807 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CAPN3P20807 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CAPN3P20807 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CAPN3P20807 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.82■□□□□ 0.44
CAPN3P20807 TMPOP1-202ENST00000424642 1267 ntBASIC17.82■□□□□ 0.44
CAPN3P20807 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.82■□□□□ 0.44
CAPN3P20807 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CAPN3P20807 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.82■□□□□ 0.44
CAPN3P20807 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.82■□□□□ 0.44
CAPN3P20807 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.82■□□□□ 0.44
CAPN3P20807 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.82■□□□□ 0.44
CAPN3P20807 MYC-208ENST00000641036 567 ntBASIC17.82■□□□□ 0.44
CAPN3P20807 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.82■□□□□ 0.44
CAPN3P20807 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CAPN3P20807 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CAPN3P20807 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms