Protein–RNA interactions for Protein: P16298

PPP3CB, Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CBP16298 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.61■□□□□ 0.25
PPP3CBP16298 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PPP3CBP16298 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PPP3CBP16298 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.61■□□□□ 0.25
PPP3CBP16298 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PPP3CBP16298 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.61■□□□□ 0.25
PPP3CBP16298 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.61■□□□□ 0.25
PPP3CBP16298 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PPP3CBP16298 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.61■□□□□ 0.25
PPP3CBP16298 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.61■□□□□ 0.25
PPP3CBP16298 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PPP3CBP16298 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
PPP3CBP16298 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
PPP3CBP16298 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
PPP3CBP16298 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PPP3CBP16298 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PPP3CBP16298 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.61■□□□□ 0.25
PPP3CBP16298 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.61■□□□□ 0.25
PPP3CBP16298 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PPP3CBP16298 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PPP3CBP16298 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PPP3CBP16298 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
PPP3CBP16298 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PPP3CBP16298 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PPP3CBP16298 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PPP3CBP16298 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.6■□□□□ 0.25
PPP3CBP16298 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PPP3CBP16298 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
PPP3CBP16298 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PPP3CBP16298 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PPP3CBP16298 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PPP3CBP16298 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PPP3CBP16298 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PPP3CBP16298 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PPP3CBP16298 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PPP3CBP16298 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.6■□□□□ 0.25
PPP3CBP16298 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.6■□□□□ 0.25
PPP3CBP16298 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.6■□□□□ 0.25
PPP3CBP16298 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PPP3CBP16298 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.6■□□□□ 0.25
PPP3CBP16298 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.6■□□□□ 0.25
PPP3CBP16298 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.6■□□□□ 0.25
PPP3CBP16298 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.6■□□□□ 0.25
PPP3CBP16298 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PPP3CBP16298 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
PPP3CBP16298 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.6■□□□□ 0.25
PPP3CBP16298 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PPP3CBP16298 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PPP3CBP16298 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.6■□□□□ 0.25
PPP3CBP16298 AC135050.7-201ENST00000624508 2218 ntBASIC16.6■□□□□ 0.25
PPP3CBP16298 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PPP3CBP16298 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.59■□□□□ 0.25
PPP3CBP16298 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PPP3CBP16298 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC16.59■□□□□ 0.25
PPP3CBP16298 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
PPP3CBP16298 AL133373.2-201ENST00000623187 2828 ntBASIC16.59■□□□□ 0.25
PPP3CBP16298 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
PPP3CBP16298 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PPP3CBP16298 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PPP3CBP16298 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.59■□□□□ 0.25
PPP3CBP16298 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.59■□□□□ 0.25
PPP3CBP16298 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PPP3CBP16298 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.59■□□□□ 0.25
PPP3CBP16298 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.59■□□□□ 0.25
PPP3CBP16298 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.59■□□□□ 0.25
PPP3CBP16298 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
PPP3CBP16298 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
PPP3CBP16298 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PPP3CBP16298 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PPP3CBP16298 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.59■□□□□ 0.25
PPP3CBP16298 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
PPP3CBP16298 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.59■□□□□ 0.25
PPP3CBP16298 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
PPP3CBP16298 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.59■□□□□ 0.25
PPP3CBP16298 AC104581.1-202ENST00000635932 2618 ntBASIC16.59■□□□□ 0.25
PPP3CBP16298 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PPP3CBP16298 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
PPP3CBP16298 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
PPP3CBP16298 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.59■□□□□ 0.25
PPP3CBP16298 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PPP3CBP16298 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
PPP3CBP16298 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PPP3CBP16298 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PPP3CBP16298 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PPP3CBP16298 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.58■□□□□ 0.25
PPP3CBP16298 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
PPP3CBP16298 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.58■□□□□ 0.25
PPP3CBP16298 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PPP3CBP16298 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
PPP3CBP16298 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
PPP3CBP16298 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.58■□□□□ 0.24
PPP3CBP16298 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PPP3CBP16298 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PPP3CBP16298 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.58■□□□□ 0.24
PPP3CBP16298 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.58■□□□□ 0.24
PPP3CBP16298 AC091076.1-201ENST00000610741 619 ntBASIC16.58■□□□□ 0.24
PPP3CBP16298 AC011558.1-201ENST00000623459 338 ntBASIC16.58■□□□□ 0.24
PPP3CBP16298 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.58■□□□□ 0.24
PPP3CBP16298 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PPP3CBP16298 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms